Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PHF1O43189 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PHF1O43189 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PHF1O43189 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PHF1O43189 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF1O43189 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.13■□□□□ 0.65
PHF1O43189 PKD1P6-201ENST00000343738 4769 ntBASIC19.13■□□□□ 0.65
PHF1O43189 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
PHF1O43189 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF1O43189 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 UNC93B3-201ENST00000308076 687 ntBASIC19.12■□□□□ 0.65
PHF1O43189 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF1O43189 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.12■□□□□ 0.65
PHF1O43189 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.12■□□□□ 0.65
PHF1O43189 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 AC004448.1-201ENST00000458332 883 ntBASIC19.12■□□□□ 0.65
PHF1O43189 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.12■□□□□ 0.65
PHF1O43189 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.12■□□□□ 0.65
PHF1O43189 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.12■□□□□ 0.65
PHF1O43189 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PHF1O43189 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF1O43189 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.11■□□□□ 0.65
PHF1O43189 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PHF1O43189 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF1O43189 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF1O43189 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF1O43189 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.11■□□□□ 0.65
PHF1O43189 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PHF1O43189 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF1O43189 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.11■□□□□ 0.65
PHF1O43189 AL031432.3-201ENST00000607698 485 ntBASIC19.11■□□□□ 0.65
PHF1O43189 AL136162.1-201ENST00000607711 1078 ntBASIC19.11■□□□□ 0.65
PHF1O43189 MIR6722-201ENST00000617286 78 ntBASIC19.11■□□□□ 0.65
PHF1O43189 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.11■□□□□ 0.65
PHF1O43189 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PHF1O43189 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PHF1O43189 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.1■□□□□ 0.65
PHF1O43189 AC131274.2-201ENST00000580697 1507 ntBASIC19.1■□□□□ 0.65
PHF1O43189 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHF1O43189 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.1■□□□□ 0.65
PHF1O43189 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PHF1O43189 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHF1O43189 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PHF1O43189 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.1■□□□□ 0.65
PHF1O43189 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PHF1O43189 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PHF1O43189 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHF1O43189 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.1■□□□□ 0.65
PHF1O43189 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PHF1O43189 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PHF1O43189 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.09■□□□□ 0.65
PHF1O43189 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PHF1O43189 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHF1O43189 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHF1O43189 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.09■□□□□ 0.65
PHF1O43189 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.09■□□□□ 0.65
PHF1O43189 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.09■□□□□ 0.65
PHF1O43189 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.09■□□□□ 0.65
PHF1O43189 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PHF1O43189 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHF1O43189 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.09■□□□□ 0.65
PHF1O43189 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.09■□□□□ 0.65
PHF1O43189 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHF1O43189 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PHF1O43189 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
PHF1O43189 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.08■□□□□ 0.65
PHF1O43189 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PHF1O43189 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PHF1O43189 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PHF1O43189 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
PHF1O43189 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PHF1O43189 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.08■□□□□ 0.65
PHF1O43189 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
PHF1O43189 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
PHF1O43189 AC105265.2-201ENST00000467189 838 ntBASIC19.08■□□□□ 0.64
PHF1O43189 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.08■□□□□ 0.64
PHF1O43189 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PHF1O43189 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.08■□□□□ 0.64
PHF1O43189 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.08■□□□□ 0.64
PHF1O43189 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.08■□□□□ 0.64
PHF1O43189 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHF1O43189 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHF1O43189 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHF1O43189 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PHF1O43189 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.08■□□□□ 0.64
PHF1O43189 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHF1O43189 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PHF1O43189 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PHF1O43189 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PHF1O43189 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms