Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.85■■□□□ 1.09
EIF3FO00303 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.85■■□□□ 1.09
EIF3FO00303 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3FO00303 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3FO00303 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
EIF3FO00303 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.85■■□□□ 1.09
EIF3FO00303 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.85■■□□□ 1.09
EIF3FO00303 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
EIF3FO00303 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.85■■□□□ 1.09
EIF3FO00303 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
EIF3FO00303 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.85■■□□□ 1.09
EIF3FO00303 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.85■■□□□ 1.09
EIF3FO00303 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
EIF3FO00303 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3FO00303 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3FO00303 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.84■■□□□ 1.09
EIF3FO00303 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3FO00303 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.84■■□□□ 1.09
EIF3FO00303 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.84■■□□□ 1.09
EIF3FO00303 AC009086.3-201ENST00000623486 1008 ntBASIC21.84■■□□□ 1.09
EIF3FO00303 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3FO00303 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
EIF3FO00303 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.84■■□□□ 1.09
EIF3FO00303 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.83■■□□□ 1.09
EIF3FO00303 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3FO00303 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3FO00303 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3FO00303 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3FO00303 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.83■■□□□ 1.09
EIF3FO00303 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
EIF3FO00303 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
EIF3FO00303 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
EIF3FO00303 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
EIF3FO00303 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
EIF3FO00303 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
EIF3FO00303 AL356441.2-201ENST00000443009 864 ntBASIC21.82■■□□□ 1.08
EIF3FO00303 AC241377.3-202ENST00000626088 1088 ntBASIC21.82■■□□□ 1.08
EIF3FO00303 AC241585.3-202ENST00000628937 1088 ntBASIC21.82■■□□□ 1.08
EIF3FO00303 AC245100.8-202ENST00000629247 1058 ntBASIC21.82■■□□□ 1.08
EIF3FO00303 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
EIF3FO00303 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.82■■□□□ 1.08
EIF3FO00303 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
EIF3FO00303 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
EIF3FO00303 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EIF3FO00303 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.81■■□□□ 1.08
EIF3FO00303 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
EIF3FO00303 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.81■■□□□ 1.08
EIF3FO00303 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.81■■□□□ 1.08
EIF3FO00303 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
EIF3FO00303 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
EIF3FO00303 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.81■■□□□ 1.08
EIF3FO00303 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3FO00303 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3FO00303 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3FO00303 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.8■■□□□ 1.08
EIF3FO00303 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3FO00303 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3FO00303 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3FO00303 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3FO00303 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
EIF3FO00303 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3FO00303 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
EIF3FO00303 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.79■■□□□ 1.08
EIF3FO00303 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
EIF3FO00303 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3FO00303 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
EIF3FO00303 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3FO00303 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.79■■□□□ 1.08
EIF3FO00303 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3FO00303 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3FO00303 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
EIF3FO00303 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.78■■□□□ 1.08
EIF3FO00303 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3FO00303 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3FO00303 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
EIF3FO00303 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3FO00303 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3FO00303 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.77■■□□□ 1.08
EIF3FO00303 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.77■■□□□ 1.08
EIF3FO00303 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
EIF3FO00303 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.77■■□□□ 1.08
EIF3FO00303 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.77■■□□□ 1.08
EIF3FO00303 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.77■■□□□ 1.08
EIF3FO00303 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.77■■□□□ 1.08
EIF3FO00303 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3FO00303 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.77■■□□□ 1.07
EIF3FO00303 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
EIF3FO00303 ESRRAP2-201ENST00000418437 1549 ntBASIC21.76■■□□□ 1.07
EIF3FO00303 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
EIF3FO00303 C9orf163-202ENST00000624034 2573 ntBASIC21.76■■□□□ 1.07
EIF3FO00303 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.76■■□□□ 1.07
EIF3FO00303 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms