Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SIRPB1O00241 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.82■□□□□ 0.6
SIRPB1O00241 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPB1O00241 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPB1O00241 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPB1O00241 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.82■□□□□ 0.6
SIRPB1O00241 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.82■□□□□ 0.6
SIRPB1O00241 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SIRPB1O00241 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPB1O00241 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPB1O00241 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPB1O00241 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPB1O00241 AL353803.4-201ENST00000565882 1934 ntBASIC18.81■□□□□ 0.6
SIRPB1O00241 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SIRPB1O00241 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.81■□□□□ 0.6
SIRPB1O00241 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SIRPB1O00241 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPB1O00241 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.81■□□□□ 0.6
SIRPB1O00241 C1orf229-201ENST00000623686 2258 ntBASIC18.81■□□□□ 0.6
SIRPB1O00241 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPB1O00241 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPB1O00241 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.81■□□□□ 0.6
SIRPB1O00241 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SIRPB1O00241 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SIRPB1O00241 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.8■□□□□ 0.6
SIRPB1O00241 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.8■□□□□ 0.6
SIRPB1O00241 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SIRPB1O00241 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.8■□□□□ 0.6
SIRPB1O00241 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.8■□□□□ 0.6
SIRPB1O00241 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPB1O00241 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPB1O00241 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SIRPB1O00241 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPB1O00241 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPB1O00241 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPB1O00241 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SIRPB1O00241 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPB1O00241 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPB1O00241 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SIRPB1O00241 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPB1O00241 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.78■□□□□ 0.6
SIRPB1O00241 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SIRPB1O00241 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPB1O00241 AC010997.5-201ENST00000609182 354 ntBASIC18.78■□□□□ 0.6
SIRPB1O00241 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SIRPB1O00241 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPB1O00241 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SIRPB1O00241 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.77■□□□□ 0.6
SIRPB1O00241 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
SIRPB1O00241 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.77■□□□□ 0.6
SIRPB1O00241 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 PKD1P6-201ENST00000343738 4769 ntBASIC18.77■□□□□ 0.6
SIRPB1O00241 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPB1O00241 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SIRPB1O00241 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIRPB1O00241 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SIRPB1O00241 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SIRPB1O00241 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIRPB1O00241 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.77■□□□□ 0.59
SIRPB1O00241 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.77■□□□□ 0.59
SIRPB1O00241 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIRPB1O00241 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIRPB1O00241 AC144652.1-201ENST00000609974 1624 ntBASIC18.76■□□□□ 0.59
SIRPB1O00241 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIRPB1O00241 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.76■□□□□ 0.59
SIRPB1O00241 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.76■□□□□ 0.59
SIRPB1O00241 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIRPB1O00241 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.76■□□□□ 0.59
SIRPB1O00241 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIRPB1O00241 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIRPB1O00241 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.75■□□□□ 0.59
SIRPB1O00241 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIRPB1O00241 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.75■□□□□ 0.59
SIRPB1O00241 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIRPB1O00241 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIRPB1O00241 AC233723.2-201ENST00000623798 2106 ntBASIC18.75■□□□□ 0.59
SIRPB1O00241 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIRPB1O00241 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms