Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
PLEKHD1A6NEE1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
PLEKHD1A6NEE1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
PLEKHD1A6NEE1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
PLEKHD1A6NEE1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
PLEKHD1A6NEE1 AC006015.1-201ENST00000429970 570 ntBASIC34.88■■■■□ 3.17
PLEKHD1A6NEE1 KRT18P61-201ENST00000585825 1298 ntBASIC34.88■■■■□ 3.17
PLEKHD1A6NEE1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC34.88■■■■□ 3.17
PLEKHD1A6NEE1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
PLEKHD1A6NEE1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC34.87■■■■□ 3.17
PLEKHD1A6NEE1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC34.87■■■■□ 3.17
PLEKHD1A6NEE1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
PLEKHD1A6NEE1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PLEKHD1A6NEE1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC34.87■■■■□ 3.17
PLEKHD1A6NEE1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PLEKHD1A6NEE1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC34.87■■■■□ 3.17
PLEKHD1A6NEE1 AC080038.1-201ENST00000611274 1154 ntBASIC34.87■■■■□ 3.17
PLEKHD1A6NEE1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
PLEKHD1A6NEE1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC34.85■■■■□ 3.17
PLEKHD1A6NEE1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
PLEKHD1A6NEE1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
PLEKHD1A6NEE1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
PLEKHD1A6NEE1 RAP2CP1-201ENST00000605103 478 ntBASIC34.84■■■■□ 3.17
PLEKHD1A6NEE1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC34.83■■■■□ 3.17
PLEKHD1A6NEE1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
PLEKHD1A6NEE1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC34.81■■■■□ 3.16
PLEKHD1A6NEE1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
PLEKHD1A6NEE1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC34.81■■■■□ 3.16
PLEKHD1A6NEE1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC34.81■■■■□ 3.16
PLEKHD1A6NEE1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
PLEKHD1A6NEE1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
PLEKHD1A6NEE1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
PLEKHD1A6NEE1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
PLEKHD1A6NEE1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC34.79■■■■□ 3.16
PLEKHD1A6NEE1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC34.79■■■■□ 3.16
PLEKHD1A6NEE1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC34.79■■■■□ 3.16
PLEKHD1A6NEE1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC34.78■■■■□ 3.16
PLEKHD1A6NEE1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
PLEKHD1A6NEE1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC34.78■■■■□ 3.16
PLEKHD1A6NEE1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
PLEKHD1A6NEE1 CDCA4P2-201ENST00000441182 718 ntBASIC34.78■■■■□ 3.16
PLEKHD1A6NEE1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
PLEKHD1A6NEE1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC34.78■■■■□ 3.16
PLEKHD1A6NEE1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
PLEKHD1A6NEE1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
PLEKHD1A6NEE1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.16
PLEKHD1A6NEE1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
PLEKHD1A6NEE1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC34.76■■■■□ 3.16
PLEKHD1A6NEE1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
PLEKHD1A6NEE1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
PLEKHD1A6NEE1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
PLEKHD1A6NEE1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC34.75■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms