Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 AL451085.2-201ENST00000605085 799 ntBASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV6-4A0A1B0GX49 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 ESRRAP2-201ENST00000418437 1549 ntBASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-4A0A1B0GX49 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 TSPY9P-201ENST00000440215 945 ntBASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 TSPY11P-201ENST00000442607 1045 ntBASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 C1orf229-201ENST00000623686 2258 ntBASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 AC233723.2-201ENST00000623798 2106 ntBASIC15.71■□□□□ 0.11
TRBV6-4A0A1B0GX49 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV6-4A0A1B0GX49 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV6-4A0A1B0GX49 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBV6-4A0A1B0GX49 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-4A0A1B0GX49 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-4A0A1B0GX49 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-4A0A1B0GX49 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-4A0A1B0GX49 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBV6-4A0A1B0GX49 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV6-4A0A1B0GX49 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV6-4A0A1B0GX49 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 AL117328.2-201ENST00000624617 1940 ntBASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 DUX4L4-201ENST00000566884 1269 ntBASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-4A0A1B0GX49 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 MIR6724-1-201ENST00000616420 92 ntBASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 MIR6724-2-201ENST00000616483 92 ntBASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 MIR6724-4-201ENST00000617390 92 ntBASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 MIR6724-3-201ENST00000622482 92 ntBASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 AC009086.3-201ENST00000623486 1008 ntBASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 AC009102.2-201ENST00000606772 1639 ntBASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-4A0A1B0GX49 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-4A0A1B0GX49 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms