Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF103-CHMP3A0A140T963 DUSP8P3-201ENST00000399571 1760 ntBASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RNF103-CHMP3A0A140T963 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 AL033527.3-201ENST00000566366 1196 ntBASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF103-CHMP3A0A140T963 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 AF131216.4-201ENST00000638924 1588 ntBASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF103-CHMP3A0A140T963 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF103-CHMP3A0A140T963 AC092068.2-201ENST00000590491 1708 ntBASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF103-CHMP3A0A140T963 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 MIR4508-201ENST00000584178 70 ntBASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 ECEL1P1-201ENST00000373592 1742 ntBASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF103-CHMP3A0A140T963 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF103-CHMP3A0A140T963 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms