Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV6A0A075B6T7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.08■□□□□ 0.65
TRAV6A0A075B6T7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TRAV6A0A075B6T7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.08■□□□□ 0.65
TRAV6A0A075B6T7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV6A0A075B6T7 HLA-V-202ENST00000446817 847 ntBASIC19.08■□□□□ 0.64
TRAV6A0A075B6T7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV6A0A075B6T7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV6A0A075B6T7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV6A0A075B6T7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV6A0A075B6T7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV6A0A075B6T7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TRAV6A0A075B6T7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV6A0A075B6T7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV6A0A075B6T7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 DUX4L29-201ENST00000425409 679 ntBASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 AC126177.7-201ENST00000547904 679 ntBASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 AL161729.1-201ENST00000604104 1402 ntBASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV6A0A075B6T7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV6A0A075B6T7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 AC044849.2-201ENST00000606596 710 ntBASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 AC005229.4-201ENST00000610085 2198 ntBASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV6A0A075B6T7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
TRAV6A0A075B6T7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV6A0A075B6T7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV6A0A075B6T7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV6A0A075B6T7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV6A0A075B6T7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV6A0A075B6T7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV6A0A075B6T7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV6A0A075B6T7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV6A0A075B6T7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV6A0A075B6T7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV6A0A075B6T7 AC079630.1-202ENST00000618127 1840 ntBASIC19.02■□□□□ 0.63
TRAV6A0A075B6T7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TRAV6A0A075B6T7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms