Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AC005632.3-201ENST00000605544 308 ntBASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 PCDHB18P-202ENST00000526308 3197 ntBASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PPARGC1AQ9UBK2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 SALL4P6-201ENST00000429385 1691 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AC138761.6-201ENST00000583997 1423 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 SCARNA12-201ENST00000459155 270 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AC130709.1-201ENST00000484779 1212 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AC095040.1-201ENST00000513286 675 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 COQ10BP2-201ENST00000513804 724 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 MIR4522-201ENST00000584932 87 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AC103691.2-201ENST00000618824 433 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 BEND3P3-201ENST00000611030 2440 ntBASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.42□□□□□ -0.1
PPARGC1AQ9UBK2 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PPARGC1AQ9UBK2 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms