Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 HERC2P11-201ENST00000562845 725 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AC100756.2-201ENST00000569537 736 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AC091769.1-201ENST00000619576 568 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AP001184.1-201ENST00000637936 376 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AC087386.2-201ENST00000623212 4637 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AL031595.1-201ENST00000623969 4709 ntBASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD3Q7Z3D4 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AC006480.2-201ENST00000609770 1337 ntBASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AC007279.1-201ENST00000448547 837 ntBASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 KRT8P2-201ENST00000556193 944 ntBASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AC007881.3-201ENST00000608897 607 ntBASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AF013593.1-201ENST00000458074 1487 ntBASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 AC040160.2-201ENST00000623816 1675 ntBASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD3Q7Z3D4 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
LYSMD3Q7Z3D4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LYSMD3Q7Z3D4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 Z98885.3-201ENST00000624882 1757 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms