Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDC42BPAQ5VT25 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 PPP1R2P10-201ENST00000393023 595 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 GGT8P-201ENST00000418938 532 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 HNRNPA1P68-201ENST00000425806 979 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AC126471.1-201ENST00000550676 362 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AL136298.3-201ENST00000556746 445 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 MIR4309-201ENST00000582498 83 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AL158032.2-201ENST00000616818 195 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AL928921.2-201ENST00000641325 2442 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 AC015656.1-201ENST00000624209 3578 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 MSNP1-201ENST00000511640 1732 ntBASIC19.94■□□□□ 0.78
CDC42BPAQ5VT25 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 POLR3DP1-201ENST00000398689 1176 ntBASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 AC004623.1-201ENST00000624592 2127 ntBASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 AL606834.1-201ENST00000553836 1169 ntBASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC19.93■□□□□ 0.78
CDC42BPAQ5VT25 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 OBP2A-202ENST00000342114 607 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 OR7E122P-201ENST00000383606 1017 ntBASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 AC103706.1-201ENST00000561761 679 ntBASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 AL139823.1-201ENST00000641871 1225 ntBASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 AC009474.1-201ENST00000455096 1565 ntBASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 MIPEPP1-201ENST00000413533 2027 ntBASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 AC015959.1-201ENST00000623263 1377 ntBASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC19.92■□□□□ 0.78
CDC42BPAQ5VT25 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms