Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC064836.3-201ENST00000607928 673 ntBASIC14.33□□□□□ -0.12
CBX1P83916 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CBX1P83916 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CBX1P83916 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC14.33□□□□□ -0.12
CBX1P83916 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC14.33□□□□□ -0.12
CBX1P83916 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.33□□□□□ -0.12
CBX1P83916 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.33□□□□□ -0.12
CBX1P83916 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CBX1P83916 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC14.33□□□□□ -0.12
CBX1P83916 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC14.33□□□□□ -0.12
CBX1P83916 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CBX1P83916 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CBX1P83916 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CBX1P83916 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 TIAM2-206ENST00000456877 3275 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 POM121L1P-202ENST00000605258 1835 ntBASIC14.32□□□□□ -0.12
CBX1P83916 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 TLR5-201ENST00000366881 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 BSND-201ENST00000371265 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CBX1P83916 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CBX1P83916 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.32□□□□□ -0.12
CBX1P83916 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.32□□□□□ -0.12
CBX1P83916 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.32□□□□□ -0.12
CBX1P83916 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.32□□□□□ -0.12
CBX1P83916 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CBX1P83916 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.32□□□□□ -0.12
CBX1P83916 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.32□□□□□ -0.12
CBX1P83916 AC025048.3-201ENST00000590609 569 ntBASIC14.32□□□□□ -0.12
CBX1P83916 Z83851.2-201ENST00000609564 659 ntBASIC14.32□□□□□ -0.12
CBX1P83916 AC005702.4-201ENST00000618393 416 ntBASIC14.32□□□□□ -0.12
CBX1P83916 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.32□□□□□ -0.12
CBX1P83916 LINC00319-202ENST00000448049 3507 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 PIK3CD-207ENST00000543390 3503 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 AF067845.2-201ENST00000617093 3049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 AC005537.1-203ENST00000629291 1748 ntTSL 5 BASIC14.32□□□□□ -0.12
CBX1P83916 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC14.32□□□□□ -0.12
CBX1P83916 DMBX1-202ENST00000371956 2882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CBX1P83916 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CBX1P83916 LTF-201ENST00000231751 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 AC122688.3-201ENST00000623804 3467 ntBASIC14.31□□□□□ -0.12
CBX1P83916 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 AC012313.5-201ENST00000594816 2517 ntBASIC14.31□□□□□ -0.12
CBX1P83916 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CBX1P83916 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.31□□□□□ -0.12
CBX1P83916 AL355306.1-201ENST00000415580 579 ntBASIC14.31□□□□□ -0.12
CBX1P83916 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms