Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 WASH4P-201ENST00000564273 1246 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 PPY2P-201ENST00000582808 702 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC9.39□□□□□ -0.91
CXCL5P42830 AL356740.1-201ENST00000602192 1297 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 AC023511.2-201ENST00000618803 211 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 AL139424.3-202ENST00000641619 917 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 NBN-203ENST00000409330 4523 ntTSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 AMT-256ENST00000638063 1783 ntTSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC9.39□□□□□ -0.91
CXCL5P42830 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 KRT8P4-201ENST00000509735 1454 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 C2-209ENST00000452323 1999 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 FLJ30679-201ENST00000624773 1980 ntBASIC9.39□□□□□ -0.91
CXCL5P42830 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC9.39□□□□□ -0.91
CXCL5P42830 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CXCL5P42830 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
CXCL5P42830 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
CXCL5P42830 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
CXCL5P42830 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 AC098614.1-201ENST00000368528 745 ntBASIC9.38□□□□□ -0.91
CXCL5P42830 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 FAM197Y7-201ENST00000432892 766 ntBASIC9.38□□□□□ -0.91
CXCL5P42830 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 TSPY16P-201ENST00000449843 468 ntBASIC9.38□□□□□ -0.91
CXCL5P42830 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC9.38□□□□□ -0.91
CXCL5P42830 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 APRT-204ENST00000563655 709 ntTSL 5 BASIC9.38□□□□□ -0.91
CXCL5P42830 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC9.38□□□□□ -0.91
CXCL5P42830 TP53TG3HP-202ENST00000569755 579 ntBASIC9.38□□□□□ -0.91
CXCL5P42830 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC9.38□□□□□ -0.91
CXCL5P42830 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
CXCL5P42830 AL355385.1-201ENST00000606123 409 ntBASIC9.38□□□□□ -0.91
CXCL5P42830 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
CXCL5P42830 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 CARS-214ENST00000529772 2637 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
CXCL5P42830 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
CXCL5P42830 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CXCL5P42830 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC9.38□□□□□ -0.91
CXCL5P42830 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms