Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC010976.2-201ENST00000609697 852 ntBASIC14.83□□□□□ -0.04
TNFSF9P41273 LINC00431-202ENST00000636375 159 ntBASIC14.83□□□□□ -0.04
TNFSF9P41273 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF9P41273 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
TNFSF9P41273 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF9P41273 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF9P41273 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF9P41273 AL513497.1-201ENST00000624273 2083 ntBASIC14.83□□□□□ -0.04
TNFSF9P41273 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TNFSF9P41273 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TNFSF9P41273 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TNFSF9P41273 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFSF9P41273 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF9P41273 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF9P41273 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TNFSF9P41273 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFSF9P41273 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFSF9P41273 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFSF9P41273 AC103563.1-201ENST00000429316 123 ntBASIC14.82□□□□□ -0.04
TNFSF9P41273 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 AC026410.1-201ENST00000507366 1101 ntBASIC14.82□□□□□ -0.04
TNFSF9P41273 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.82□□□□□ -0.04
TNFSF9P41273 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.82□□□□□ -0.04
TNFSF9P41273 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFSF9P41273 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.82□□□□□ -0.04
TNFSF9P41273 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 AC126755.5-201ENST00000622756 267 ntBASIC14.82□□□□□ -0.04
TNFSF9P41273 AC009084.3-201ENST00000623356 437 ntBASIC14.82□□□□□ -0.04
TNFSF9P41273 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF9P41273 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TNFSF9P41273 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.82□□□□□ -0.04
TNFSF9P41273 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.82□□□□□ -0.04
TNFSF9P41273 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TNFSF9P41273 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TNFSF9P41273 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF9P41273 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF9P41273 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.81□□□□□ -0.04
TNFSF9P41273 PGAM1P12-201ENST00000505622 748 ntBASIC14.81□□□□□ -0.04
TNFSF9P41273 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF9P41273 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF9P41273 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TNFSF9P41273 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.81□□□□□ -0.04
TNFSF9P41273 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 AC011471.3-201ENST00000623576 402 ntBASIC14.81□□□□□ -0.04
TNFSF9P41273 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF9P41273 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TNFSF9P41273 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF9P41273 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms