Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC092117.1-201ENST00000621230 3250 ntBASIC12.79□□□□□ -0.36
BMP4P12644 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BMP4P12644 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.78□□□□□ -0.36
BMP4P12644 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BMP4P12644 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BMP4P12644 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.78□□□□□ -0.36
BMP4P12644 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.78□□□□□ -0.36
BMP4P12644 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 MIR769-201ENST00000390225 118 ntBASIC12.78□□□□□ -0.36
BMP4P12644 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 SLC25A24P2-201ENST00000415059 510 ntBASIC12.78□□□□□ -0.36
BMP4P12644 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.78□□□□□ -0.36
BMP4P12644 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.78□□□□□ -0.36
BMP4P12644 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.78□□□□□ -0.36
BMP4P12644 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.78□□□□□ -0.36
BMP4P12644 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.78□□□□□ -0.36
BMP4P12644 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.78□□□□□ -0.36
BMP4P12644 AL136301.1-201ENST00000615830 422 ntBASIC12.78□□□□□ -0.36
BMP4P12644 AP001002.3-201ENST00000623482 206 ntBASIC12.78□□□□□ -0.36
BMP4P12644 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.78□□□□□ -0.36
BMP4P12644 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
BMP4P12644 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 AC002350.2-201ENST00000623894 1828 ntBASIC12.78□□□□□ -0.36
BMP4P12644 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 AC092139.4-201ENST00000624318 2794 ntBASIC12.78□□□□□ -0.36
BMP4P12644 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BMP4P12644 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
BMP4P12644 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BMP4P12644 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BMP4P12644 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BMP4P12644 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BMP4P12644 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BMP4P12644 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BMP4P12644 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BMP4P12644 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
BMP4P12644 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
BMP4P12644 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.77□□□□□ -0.36
BMP4P12644 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.77□□□□□ -0.36
BMP4P12644 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BMP4P12644 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
BMP4P12644 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
BMP4P12644 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.77□□□□□ -0.37
BMP4P12644 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.77□□□□□ -0.37
BMP4P12644 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BMP4P12644 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BMP4P12644 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
BMP4P12644 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.77□□□□□ -0.37
BMP4P12644 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
BMP4P12644 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
BMP4P12644 TLE1P1-201ENST00000422965 589 ntBASIC12.77□□□□□ -0.37
BMP4P12644 AL354877.1-201ENST00000424412 413 ntBASIC12.77□□□□□ -0.37
BMP4P12644 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.77□□□□□ -0.37
BMP4P12644 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.77□□□□□ -0.37
BMP4P12644 CHMP1AP1-201ENST00000445563 662 ntBASIC12.77□□□□□ -0.37
BMP4P12644 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
BMP4P12644 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 SERPINA13P-202ENST00000478994 924 ntBASIC12.77□□□□□ -0.37
BMP4P12644 AC026434.2-201ENST00000506094 1078 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms