Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC15□□□□□ -0.01
VTNP04004 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
VTNP04004 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15□□□□□ -0.01
VTNP04004 MANEA-AS1-201ENST00000564541 2268 ntBASIC15□□□□□ -0.01
VTNP04004 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VTNP04004 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15□□□□□ -0.01
VTNP04004 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15□□□□□ -0.01
VTNP04004 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VTNP04004 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
VTNP04004 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.99□□□□□ -0.01
VTNP04004 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.99□□□□□ -0.01
VTNP04004 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC14.99□□□□□ -0.01
VTNP04004 VDAC1P11-201ENST00000458323 852 ntBASIC14.99□□□□□ -0.01
VTNP04004 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
VTNP04004 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 RN7SL596P-201ENST00000582123 288 ntBASIC14.99□□□□□ -0.01
VTNP04004 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 AL139339.2-201ENST00000608063 657 ntBASIC14.99□□□□□ -0.01
VTNP04004 AC137723.2-201ENST00000623540 398 ntBASIC14.99□□□□□ -0.01
VTNP04004 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 SBF1P1-201ENST00000444527 5631 ntBASIC14.99□□□□□ -0.01
VTNP04004 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VTNP04004 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VTNP04004 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VTNP04004 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.98□□□□□ -0.01
VTNP04004 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VTNP04004 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VTNP04004 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VTNP04004 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
VTNP04004 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VTNP04004 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VTNP04004 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VTNP04004 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 AC104581.4-201ENST00000623126 3052 ntBASIC14.98□□□□□ -0.01
VTNP04004 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.98□□□□□ -0.01
VTNP04004 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
VTNP04004 AL513497.1-201ENST00000624273 2083 ntBASIC14.98□□□□□ -0.01
VTNP04004 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VTNP04004 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VTNP04004 SNORD23-201ENST00000408876 110 ntBASIC14.98□□□□□ -0.01
VTNP04004 AL929302.1-201ENST00000426556 871 ntBASIC14.98□□□□□ -0.01
VTNP04004 PGK1P2-201ENST00000431702 1214 ntBASIC14.98□□□□□ -0.01
VTNP04004 NRADDP-201ENST00000437305 691 ntBASIC14.98□□□□□ -0.01
VTNP04004 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.98□□□□□ -0.01
VTNP04004 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC14.98□□□□□ -0.01
VTNP04004 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.98□□□□□ -0.01
VTNP04004 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms