Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RRP7BP-205ENST00000566851 833 ntBASIC12.34□□□□□ -0.43
APOA1P02647 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.34□□□□□ -0.43
APOA1P02647 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.34□□□□□ -0.43
APOA1P02647 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.34□□□□□ -0.43
APOA1P02647 AP001462.1-201ENST00000594089 452 ntBASIC12.34□□□□□ -0.43
APOA1P02647 AL390955.2-201ENST00000603032 514 ntBASIC12.34□□□□□ -0.43
APOA1P02647 AL136317.3-201ENST00000618497 906 ntBASIC12.34□□□□□ -0.43
APOA1P02647 AC138466.3-201ENST00000619983 221 ntBASIC12.34□□□□□ -0.43
APOA1P02647 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 NTM-206ENST00000427481 2583 ntTSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.34□□□□□ -0.43
APOA1P02647 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APOA1P02647 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
APOA1P02647 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOA1P02647 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.34□□□□□ -0.43
APOA1P02647 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.34□□□□□ -0.43
APOA1P02647 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.34□□□□□ -0.43
APOA1P02647 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
APOA1P02647 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOA1P02647 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
APOA1P02647 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.33□□□□□ -0.44
APOA1P02647 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.33□□□□□ -0.44
APOA1P02647 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.33□□□□□ -0.44
APOA1P02647 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.33□□□□□ -0.44
APOA1P02647 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.33□□□□□ -0.44
APOA1P02647 AC245100.3-201ENST00000441281 285 ntBASIC12.33□□□□□ -0.44
APOA1P02647 AC009477.1-201ENST00000452936 217 ntBASIC12.33□□□□□ -0.44
APOA1P02647 AC125807.1-201ENST00000483097 614 ntBASIC12.33□□□□□ -0.44
APOA1P02647 FTLP10-202ENST00000505798 471 ntBASIC12.33□□□□□ -0.44
APOA1P02647 KRT18P25-201ENST00000508931 1278 ntBASIC12.33□□□□□ -0.44
APOA1P02647 SPDYE18-201ENST00000510091 1050 ntBASIC12.33□□□□□ -0.44
APOA1P02647 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.33□□□□□ -0.44
APOA1P02647 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.33□□□□□ -0.44
APOA1P02647 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
APOA1P02647 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
APOA1P02647 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.33□□□□□ -0.44
APOA1P02647 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.33□□□□□ -0.44
APOA1P02647 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.33□□□□□ -0.44
APOA1P02647 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
APOA1P02647 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC12.33□□□□□ -0.44
APOA1P02647 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
APOA1P02647 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
APOA1P02647 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC12.33□□□□□ -0.44
APOA1P02647 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 AC027020.2-201ENST00000602585 2389 ntBASIC12.33□□□□□ -0.44
APOA1P02647 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOA1P02647 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.32□□□□□ -0.44
APOA1P02647 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOA1P02647 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.32□□□□□ -0.44
APOA1P02647 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms