Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.37□□□□□ -0.43
CNOT4O95628 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.37□□□□□ -0.43
CNOT4O95628 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CNOT4O95628 KRT8P18-201ENST00000413425 1445 ntBASIC12.37□□□□□ -0.43
CNOT4O95628 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CNOT4O95628 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CNOT4O95628 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.36□□□□□ -0.43
CNOT4O95628 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.36□□□□□ -0.43
CNOT4O95628 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
CNOT4O95628 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CNOT4O95628 PYY2-201ENST00000315776 282 ntBASIC12.36□□□□□ -0.43
CNOT4O95628 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.36□□□□□ -0.43
CNOT4O95628 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.36□□□□□ -0.43
CNOT4O95628 AC097065.1-201ENST00000425737 517 ntBASIC12.36□□□□□ -0.43
CNOT4O95628 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.36□□□□□ -0.43
CNOT4O95628 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.36□□□□□ -0.43
CNOT4O95628 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.36□□□□□ -0.43
CNOT4O95628 KLF17P1-201ENST00000547105 1126 ntBASIC12.36□□□□□ -0.43
CNOT4O95628 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.36□□□□□ -0.43
CNOT4O95628 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.36□□□□□ -0.43
CNOT4O95628 MIR4265-201ENST00000582152 99 ntBASIC12.36□□□□□ -0.43
CNOT4O95628 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.36□□□□□ -0.43
CNOT4O95628 AP000322.3-201ENST00000608665 388 ntBASIC12.36□□□□□ -0.43
CNOT4O95628 AC007881.3-201ENST00000608897 607 ntBASIC12.36□□□□□ -0.43
CNOT4O95628 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.36□□□□□ -0.43
CNOT4O95628 AC009145.4-201ENST00000625119 1294 ntBASIC12.36□□□□□ -0.43
CNOT4O95628 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
CNOT4O95628 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.36□□□□□ -0.43
CNOT4O95628 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
CNOT4O95628 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.36□□□□□ -0.43
CNOT4O95628 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CNOT4O95628 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.36□□□□□ -0.43
CNOT4O95628 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 KRT8P24-201ENST00000560290 1559 ntBASIC12.35□□□□□ -0.43
CNOT4O95628 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.35□□□□□ -0.43
CNOT4O95628 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CNOT4O95628 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CNOT4O95628 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CNOT4O95628 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.35□□□□□ -0.43
CNOT4O95628 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CNOT4O95628 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.35□□□□□ -0.43
CNOT4O95628 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.35□□□□□ -0.43
CNOT4O95628 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.35□□□□□ -0.43
CNOT4O95628 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms