Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC026470.1-201ENST00000478038 846 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AC106047.2-201ENST00000511723 743 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AL118516.1-201ENST00000564152 670 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AP005212.2-201ENST00000584979 510 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AL160191.2-201ENST00000603975 601 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AL365181.3-201ENST00000605886 3222 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 MYO15B-237ENST00000642007 4893 ntBASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHKBP1Q8TBC3 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 BAK1P2-201ENST00000532665 631 ntBASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 BAP1-211ENST00000615113 489 ntBASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SHKBP1Q8TBC3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SHKBP1Q8TBC3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms