Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP43Q8NFH3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 MIR193BHG-211ENST00000641433 5365 ntBASIC12.94□□□□□ -0.34
NUP43Q8NFH3 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 NUTM2HP-201ENST00000442076 2498 ntBASIC12.94□□□□□ -0.34
NUP43Q8NFH3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 OR2K2-202ENST00000374428 1038 ntBASIC12.94□□□□□ -0.34
NUP43Q8NFH3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 RTN3P1-201ENST00000536295 711 ntBASIC12.94□□□□□ -0.34
NUP43Q8NFH3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 MIR4265-201ENST00000582152 99 ntBASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 DGCR9-201ENST00000609630 2415 ntBASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 AC008040.5-201ENST00000599781 1781 ntBASIC12.94□□□□□ -0.34
NUP43Q8NFH3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP43Q8NFH3 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP43Q8NFH3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms