Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AK2P2-201ENST00000439142 405 ntBASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 CLPP-205ENST00000596605 646 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 SNX20-205ENST00000610485 557 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AL590556.2-202ENST00000636906 844 ntBASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AC097359.2-201ENST00000604992 2389 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 SERF2-204ENST00000402131 586 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 IQCF4-203ENST00000428561 420 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 SAP18P2-201ENST00000434334 459 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AL356000.1-201ENST00000441073 1238 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 PIGCP1-201ENST00000527583 895 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 ACTBP9-201ENST00000587663 1099 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AL356740.1-201ENST00000602192 1297 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 CR392039.2-201ENST00000623182 509 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 BX640514.1-201ENST00000583223 1918 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AC140479.7-201ENST00000636301 2332 ntBASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD4Q5XG99 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LYSMD4Q5XG99 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms