Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CTAGE13P-201ENST00000416709 2446 ntBASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 GOLGA2P8-201ENST00000505201 779 ntBASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 AC132192.2-201ENST00000596206 1147 ntBASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 MIR6720-201ENST00000611664 98 ntBASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 E2F3P2-201ENST00000447755 1422 ntBASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 LINC00563-201ENST00000566370 1400 ntBASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ANKRD55Q3KP44 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ANKRD55Q3KP44 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms