Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RSPO4Q2I0M5 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 AC140479.7-201ENST00000636301 2332 ntBASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 MRPS16P3-201ENST00000415961 374 ntBASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 RPL21P135-201ENST00000442539 791 ntBASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 RN7SL22P-201ENST00000471800 269 ntBASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 AC009132.1-201ENST00000565194 320 ntBASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 AC136475.9-201ENST00000605240 497 ntBASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 AC026748.1-201ENST00000624349 3251 ntBASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC13.22□□□□□ -0.29
RSPO4Q2I0M5 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC064801.2-201ENST00000625052 1303 ntBASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC232323.1-201ENST00000540724 2099 ntBASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 RPL13AP5-201ENST00000439189 612 ntBASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RSPO4Q2I0M5 ATP5G1P7-201ENST00000444398 400 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms