Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 AC130709.1-201ENST00000484779 1212 ntBASIC14.85□□□□□ -0.03
PPP3CAQ08209 RN7SL375P-201ENST00000492442 298 ntBASIC14.85□□□□□ -0.03
PPP3CAQ08209 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 IGHV1-12-201ENST00000518307 205 ntBASIC14.85□□□□□ -0.03
PPP3CAQ08209 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 AC027612.1-201ENST00000445234 2395 ntBASIC14.85□□□□□ -0.03
PPP3CAQ08209 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 AP003969.2-201ENST00000623739 2275 ntBASIC14.85□□□□□ -0.03
PPP3CAQ08209 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.85□□□□□ -0.03
PPP3CAQ08209 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPP3CAQ08209 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 IL9RP3-201ENST00000442856 1674 ntBASIC14.84□□□□□ -0.03
PPP3CAQ08209 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 RN7SKP109-201ENST00000410592 316 ntBASIC14.84□□□□□ -0.03
PPP3CAQ08209 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 RNA5SP417-201ENST00000516459 108 ntBASIC14.84□□□□□ -0.03
PPP3CAQ08209 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 AC005041.3-201ENST00000606287 649 ntBASIC14.84□□□□□ -0.03
PPP3CAQ08209 AC007881.3-201ENST00000608897 607 ntBASIC14.84□□□□□ -0.03
PPP3CAQ08209 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.84□□□□□ -0.03
PPP3CAQ08209 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 AL513497.1-201ENST00000624273 2083 ntBASIC14.84□□□□□ -0.03
PPP3CAQ08209 AC074138.1-201ENST00000611182 1303 ntBASIC14.84□□□□□ -0.03
PPP3CAQ08209 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.84□□□□□ -0.03
PPP3CAQ08209 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PPP3CAQ08209 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP3CAQ08209 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP3CAQ08209 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.83□□□□□ -0.03
PPP3CAQ08209 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.83□□□□□ -0.03
PPP3CAQ08209 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PPP3CAQ08209 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.83□□□□□ -0.04
PPP3CAQ08209 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PPP3CAQ08209 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.83□□□□□ -0.04
PPP3CAQ08209 AP002761.4-201ENST00000565433 3361 ntBASIC14.83□□□□□ -0.04
PPP3CAQ08209 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP3CAQ08209 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP3CAQ08209 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PPP3CAQ08209 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP3CAQ08209 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PPP3CAQ08209 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms