Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 AC108751.1-201ENST00000490852 363 ntBASIC11.65□□□□□ -0.54
NKX2-5P52952 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-5P52952 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
NKX2-5P52952 AP000842.3-202ENST00000569238 1080 ntBASIC11.65□□□□□ -0.54
NKX2-5P52952 AC105021.1-202ENST00000570572 669 ntBASIC11.65□□□□□ -0.54
NKX2-5P52952 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.65□□□□□ -0.54
NKX2-5P52952 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
NKX2-5P52952 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
NKX2-5P52952 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 LINC00628-201ENST00000628516 1289 ntBASIC11.65□□□□□ -0.54
NKX2-5P52952 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 FLT4-206ENST00000502649 4140 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 AC025580.3-201ENST00000617932 1424 ntBASIC11.65□□□□□ -0.54
NKX2-5P52952 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-5P52952 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
NKX2-5P52952 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-5P52952 PDYN-203ENST00000540134 2472 ntAPPRIS P1 TSL 4 BASIC11.65□□□□□ -0.54
NKX2-5P52952 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-5P52952 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NKX2-5P52952 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
NKX2-5P52952 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC11.65□□□□□ -0.55
NKX2-5P52952 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
NKX2-5P52952 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.55
NKX2-5P52952 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
NKX2-5P52952 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
NKX2-5P52952 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.65□□□□□ -0.55
NKX2-5P52952 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 AC006144.1-201ENST00000424220 1600 ntBASIC11.64□□□□□ -0.55
NKX2-5P52952 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 RIC3-203ENST00000343202 2929 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 AC004494.1-201ENST00000613210 2775 ntBASIC11.64□□□□□ -0.55
NKX2-5P52952 API5-208ENST00000531273 1868 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.64□□□□□ -0.55
NKX2-5P52952 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
NKX2-5P52952 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.64□□□□□ -0.55
NKX2-5P52952 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.64□□□□□ -0.55
NKX2-5P52952 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.64□□□□□ -0.55
NKX2-5P52952 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-5P52952 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.64□□□□□ -0.55
NKX2-5P52952 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 AC012640.2-201ENST00000561606 901 ntBASIC11.64□□□□□ -0.55
NKX2-5P52952 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 ZNF488-202ENST00000591025 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
NKX2-5P52952 CDHR4-202ENST00000412678 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 F7-206ENST00000541084 2873 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-5P52952 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
NKX2-5P52952 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
NKX2-5P52952 TCN2-201ENST00000215838 2535 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-5P52952 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.63□□□□□ -0.55
NKX2-5P52952 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC11.63□□□□□ -0.55
NKX2-5P52952 NUTM2A-201ENST00000381689 3974 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
NKX2-5P52952 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.63□□□□□ -0.55
NKX2-5P52952 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-5P52952 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-5P52952 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.63□□□□□ -0.55
NKX2-5P52952 LRRC32-203ENST00000407242 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
NKX2-5P52952 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms