Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
TUBP50607 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.6□□□□□ -0.07
TUBP50607 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TUBP50607 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.59□□□□□ -0.07
TUBP50607 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.59□□□□□ -0.07
TUBP50607 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.59□□□□□ -0.07
TUBP50607 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.59□□□□□ -0.07
TUBP50607 IGHV3-37-201ENST00000518544 340 ntBASIC14.59□□□□□ -0.07
TUBP50607 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.59□□□□□ -0.07
TUBP50607 AP001065.2-201ENST00000617205 644 ntBASIC14.59□□□□□ -0.07
TUBP50607 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TUBP50607 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TUBP50607 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TUBP50607 AC111170.3-201ENST00000624282 2464 ntBASIC14.59□□□□□ -0.07
TUBP50607 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.59□□□□□ -0.07
TUBP50607 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.59□□□□□ -0.07
TUBP50607 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TUBP50607 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
TUBP50607 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TUBP50607 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TUBP50607 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.58□□□□□ -0.07
TUBP50607 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.58□□□□□ -0.07
TUBP50607 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TUBP50607 AC061965.1-201ENST00000560524 1465 ntBASIC14.58□□□□□ -0.08
TUBP50607 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBP50607 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TUBP50607 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TUBP50607 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.58□□□□□ -0.08
TUBP50607 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBP50607 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
TUBP50607 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBP50607 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TUBP50607 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBP50607 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBP50607 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBP50607 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TUBP50607 OR2W2P-201ENST00000406313 909 ntBASIC14.58□□□□□ -0.08
TUBP50607 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBP50607 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBP50607 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.58□□□□□ -0.08
TUBP50607 PRSS3P1-201ENST00000503996 742 ntBASIC14.58□□□□□ -0.08
TUBP50607 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBP50607 IGHV1-12-201ENST00000518307 205 ntBASIC14.58□□□□□ -0.08
TUBP50607 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TUBP50607 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBP50607 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.58□□□□□ -0.08
TUBP50607 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.58□□□□□ -0.08
TUBP50607 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.58□□□□□ -0.08
TUBP50607 AL139424.3-202ENST00000641619 917 ntBASIC14.58□□□□□ -0.08
TUBP50607 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.58□□□□□ -0.08
TUBP50607 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.58□□□□□ -0.08
TUBP50607 AC131212.3-201ENST00000624087 4219 ntBASIC14.58□□□□□ -0.08
TUBP50607 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBP50607 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.58□□□□□ -0.08
TUBP50607 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms