Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LCN1P31025 AC135782.3-201ENST00000562782 2105 ntBASIC12.85□□□□□ -0.35
LCN1P31025 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LCN1P31025 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.85□□□□□ -0.35
LCN1P31025 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.85□□□□□ -0.35
LCN1P31025 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LCN1P31025 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
LCN1P31025 MEX3B-202ENST00000558133 4333 ntBASIC12.85□□□□□ -0.35
LCN1P31025 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
LCN1P31025 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 AL662890.1-201ENST00000396818 632 ntBASIC12.85□□□□□ -0.35
LCN1P31025 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.85□□□□□ -0.35
LCN1P31025 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.85□□□□□ -0.35
LCN1P31025 AL592076.1-201ENST00000424448 303 ntBASIC12.85□□□□□ -0.35
LCN1P31025 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.85□□□□□ -0.35
LCN1P31025 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.85□□□□□ -0.35
LCN1P31025 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.85□□□□□ -0.35
LCN1P31025 RN7SL67P-201ENST00000492147 296 ntBASIC12.85□□□□□ -0.35
LCN1P31025 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.85□□□□□ -0.35
LCN1P31025 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 ACTG1P17-201ENST00000558391 1119 ntBASIC12.85□□□□□ -0.35
LCN1P31025 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.85□□□□□ -0.35
LCN1P31025 SIGLEC18P-201ENST00000602271 909 ntBASIC12.85□□□□□ -0.35
LCN1P31025 AC007326.1-201ENST00000604539 458 ntBASIC12.85□□□□□ -0.35
LCN1P31025 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.85□□□□□ -0.35
LCN1P31025 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.85□□□□□ -0.35
LCN1P31025 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.85□□□□□ -0.35
LCN1P31025 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.85□□□□□ -0.35
LCN1P31025 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LCN1P31025 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.85□□□□□ -0.35
LCN1P31025 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LCN1P31025 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LCN1P31025 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.84□□□□□ -0.35
LCN1P31025 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LCN1P31025 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 AL807761.2-201ENST00000422849 729 ntBASIC12.84□□□□□ -0.35
LCN1P31025 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.84□□□□□ -0.35
LCN1P31025 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.84□□□□□ -0.35
LCN1P31025 AC018638.5-201ENST00000450885 754 ntBASIC12.84□□□□□ -0.35
LCN1P31025 FTH1P22-201ENST00000456305 520 ntBASIC12.84□□□□□ -0.35
LCN1P31025 NUP210P1-202ENST00000504322 710 ntBASIC12.84□□□□□ -0.35
LCN1P31025 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
LCN1P31025 RTN3P1-201ENST00000536295 711 ntBASIC12.84□□□□□ -0.35
LCN1P31025 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.84□□□□□ -0.35
LCN1P31025 KLF17P1-201ENST00000547105 1126 ntBASIC12.84□□□□□ -0.35
LCN1P31025 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 MIR3677-201ENST00000578964 60 ntBASIC12.84□□□□□ -0.35
LCN1P31025 AC091812.3-201ENST00000621362 345 ntBASIC12.84□□□□□ -0.35
LCN1P31025 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 AC138761.6-201ENST00000583997 1423 ntBASIC12.84□□□□□ -0.35
LCN1P31025 NRADDP-202ENST00000641269 1585 ntBASIC12.84□□□□□ -0.35
LCN1P31025 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.84□□□□□ -0.35
LCN1P31025 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
LCN1P31025 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LCN1P31025 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.84□□□□□ -0.35
LCN1P31025 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.84□□□□□ -0.35
LCN1P31025 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.84□□□□□ -0.35
LCN1P31025 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LCN1P31025 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms