Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 TNRC18P1-201ENST00000502875 3650 ntBASIC13.29□□□□□ -0.28
HTR1EP28566 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.29□□□□□ -0.28
HTR1EP28566 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HTR1EP28566 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.29□□□□□ -0.28
HTR1EP28566 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 AC114501.1-201ENST00000445949 172 ntBASIC13.29□□□□□ -0.28
HTR1EP28566 AL353637.1-201ENST00000451571 732 ntBASIC13.29□□□□□ -0.28
HTR1EP28566 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HTR1EP28566 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HTR1EP28566 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.29□□□□□ -0.28
HTR1EP28566 IGLV3-15-201ENST00000518356 244 ntBASIC13.29□□□□□ -0.28
HTR1EP28566 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.29□□□□□ -0.28
HTR1EP28566 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.29□□□□□ -0.28
HTR1EP28566 DUX4L46-201ENST00000566845 751 ntBASIC13.29□□□□□ -0.28
HTR1EP28566 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.29□□□□□ -0.28
HTR1EP28566 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 AL353770.1-201ENST00000614915 403 ntBASIC13.29□□□□□ -0.28
HTR1EP28566 AL136295.7-201ENST00000619226 1200 ntBASIC13.29□□□□□ -0.28
HTR1EP28566 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HTR1EP28566 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
HTR1EP28566 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HTR1EP28566 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HTR1EP28566 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.28□□□□□ -0.28
HTR1EP28566 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 AC004899.1-201ENST00000424687 1714 ntBASIC13.28□□□□□ -0.28
HTR1EP28566 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HTR1EP28566 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HTR1EP28566 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.28□□□□□ -0.28
HTR1EP28566 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.28□□□□□ -0.28
HTR1EP28566 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 GOLGA2P8-201ENST00000505201 779 ntBASIC13.28□□□□□ -0.28
HTR1EP28566 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
HTR1EP28566 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 AC003686.1-201ENST00000550956 1034 ntBASIC13.28□□□□□ -0.28
HTR1EP28566 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR1EP28566 AC012044.1-201ENST00000603431 297 ntBASIC13.28□□□□□ -0.28
HTR1EP28566 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR1EP28566 AF254983.2-201ENST00000612331 135 ntBASIC13.28□□□□□ -0.28
HTR1EP28566 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.28□□□□□ -0.28
HTR1EP28566 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.28□□□□□ -0.28
HTR1EP28566 LINC00115-201ENST00000473798 1317 ntBASIC13.28□□□□□ -0.28
HTR1EP28566 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HTR1EP28566 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms