Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC10.47□□□□□ -0.73
COLCA2A8K830 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
COLCA2A8K830 F7-206ENST00000541084 2873 ntTSL 2 BASIC10.47□□□□□ -0.73
COLCA2A8K830 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
COLCA2A8K830 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
COLCA2A8K830 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC10.47□□□□□ -0.73
COLCA2A8K830 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC10.47□□□□□ -0.73
COLCA2A8K830 CDH4-201ENST00000543233 3117 ntTSL 2 BASIC10.47□□□□□ -0.73
COLCA2A8K830 PLIN5-206ENST00000592610 1903 ntBASIC10.46□□□□□ -0.73
COLCA2A8K830 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 SLC7A7-202ENST00000397528 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 SLC7A7-203ENST00000397529 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC10.46□□□□□ -0.73
COLCA2A8K830 FAM84A-202ENST00000331243 3765 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
COLCA2A8K830 CASP7-204ENST00000369321 2620 ntTSL 2 BASIC10.46□□□□□ -0.73
COLCA2A8K830 FLJ37035-202ENST00000423178 2600 ntTSL 2 BASIC10.46□□□□□ -0.73
COLCA2A8K830 C1orf127-201ENST00000377004 2761 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
COLCA2A8K830 AL683813.1-201ENST00000435597 3018 ntTSL 2 BASIC10.46□□□□□ -0.73
COLCA2A8K830 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 MAP10-201ENST00000418460 3516 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
COLCA2A8K830 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.46□□□□□ -0.73
COLCA2A8K830 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 INIP-202ENST00000374236 874 ntTSL 2 BASIC10.46□□□□□ -0.73
COLCA2A8K830 AC103592.1-201ENST00000394513 664 ntBASIC10.46□□□□□ -0.73
COLCA2A8K830 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC10.46□□□□□ -0.73
COLCA2A8K830 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.46□□□□□ -0.73
COLCA2A8K830 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC10.46□□□□□ -0.73
COLCA2A8K830 AQP7-207ENST00000447660 998 ntTSL 2 BASIC10.46□□□□□ -0.73
COLCA2A8K830 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.46□□□□□ -0.73
COLCA2A8K830 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.46□□□□□ -0.73
COLCA2A8K830 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
COLCA2A8K830 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
COLCA2A8K830 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 AL133215.2-201ENST00000609242 977 ntBASIC10.46□□□□□ -0.73
COLCA2A8K830 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.46□□□□□ -0.73
COLCA2A8K830 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.46□□□□□ -0.73
COLCA2A8K830 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 AC004461.2-201ENST00000629517 803 ntBASIC10.46□□□□□ -0.73
COLCA2A8K830 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
COLCA2A8K830 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
COLCA2A8K830 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
COLCA2A8K830 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
COLCA2A8K830 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC10.46□□□□□ -0.74
COLCA2A8K830 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 PCID2-204ENST00000375459 1668 ntTSL 2 BASIC10.46□□□□□ -0.74
COLCA2A8K830 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC10.46□□□□□ -0.74
COLCA2A8K830 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.46□□□□□ -0.74
COLCA2A8K830 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 NRG1-212ENST00000521670 1769 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 AC122129.1-201ENST00000354746 1815 ntBASIC10.46□□□□□ -0.74
COLCA2A8K830 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.46□□□□□ -0.74
COLCA2A8K830 ASB9-209ENST00000546332 1947 ntTSL 2 BASIC10.46□□□□□ -0.74
COLCA2A8K830 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC10.46□□□□□ -0.74
COLCA2A8K830 IL36RN-201ENST00000346807 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 PYGL-205ENST00000532462 2711 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC10.46□□□□□ -0.74
COLCA2A8K830 ZSCAN2-204ENST00000358472 3231 ntTSL 2 BASIC10.46□□□□□ -0.74
COLCA2A8K830 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 CDH5-208ENST00000614547 3779 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
COLCA2A8K830 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 TCTE1-202ENST00000371505 3067 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 PRKCQ-202ENST00000397176 3096 ntTSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 TFIP11-202ENST00000407148 2789 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 HTR5A-AS1-201ENST00000395731 2703 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 RUNX1T1-202ENST00000360348 2370 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 IGSF5-201ENST00000380588 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC10.45□□□□□ -0.74
COLCA2A8K830 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
COLCA2A8K830 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
COLCA2A8K830 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC10.45□□□□□ -0.74
COLCA2A8K830 AC010201.2-201ENST00000605595 1495 ntBASIC10.45□□□□□ -0.74
COLCA2A8K830 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
COLCA2A8K830 SHMT1P1-201ENST00000419974 1312 ntBASIC10.45□□□□□ -0.74
COLCA2A8K830 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms