Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 KRT18P36-201ENST00000411618 1276 ntBASIC14.34□□□□□ -0.11
CCDC25Q86WR0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC25Q86WR0 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC25Q86WR0 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AC020763.3-201ENST00000625095 2904 ntBASIC14.33□□□□□ -0.12
CCDC25Q86WR0 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AC018629.1-201ENST00000623381 1736 ntBASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 KRT17P7-201ENST00000451704 1104 ntBASIC14.33□□□□□ -0.12
CCDC25Q86WR0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 RHOXF1P1-202ENST00000635473 501 ntBASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC25Q86WR0 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms