Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 FXNP2-201ENST00000411625 547 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 AC092573.1-201ENST00000433054 884 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 AC018638.5-201ENST00000450885 754 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 GRPEL2P1-201ENST00000453145 339 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 CHCHD2P9-201ENST00000461726 456 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 COQ10BP2-201ENST00000513804 724 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 MIR4722-201ENST00000578292 60 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 AC084781.1-201ENST00000613737 656 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 NRADDP-202ENST00000641269 1585 ntBASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD3Q7Z3D4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 ABCD1P2-201ENST00000429313 1601 ntBASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 ODCP-201ENST00000459650 1639 ntBASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AC019109.1-201ENST00000401725 1874 ntBASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 EEF1DP2-201ENST00000433698 843 ntBASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 OR5BD1P-201ENST00000532527 817 ntBASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 COA4-204ENST00000541455 1038 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD3Q7Z3D4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms