Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBP50607 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBP50607 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.61□□□□□ -0.07
TUBP50607 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.61□□□□□ -0.07
TUBP50607 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 AP003398.1-201ENST00000531124 318 ntBASIC14.61□□□□□ -0.07
TUBP50607 CR383656.3-201ENST00000551315 183 ntBASIC14.61□□□□□ -0.07
TUBP50607 RN7SL357P-201ENST00000581065 298 ntBASIC14.61□□□□□ -0.07
TUBP50607 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TUBP50607 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 AC091769.1-201ENST00000619576 568 ntBASIC14.61□□□□□ -0.07
TUBP50607 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TUBP50607 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TUBP50607 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TUBP50607 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBP50607 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.6□□□□□ -0.07
TUBP50607 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.6□□□□□ -0.07
TUBP50607 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.6□□□□□ -0.07
TUBP50607 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TUBP50607 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.6□□□□□ -0.07
TUBP50607 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.6□□□□□ -0.07
TUBP50607 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 U62317.3-201ENST00000608319 855 ntBASIC14.6□□□□□ -0.07
TUBP50607 LINC00244-201ENST00000625073 613 ntBASIC14.6□□□□□ -0.07
TUBP50607 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.6□□□□□ -0.07
TUBP50607 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TUBP50607 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBP50607 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.6□□□□□ -0.07
TUBP50607 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms