Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.42□□□□□ -0.1
MMP13P45452 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 BANF1P3-201ENST00000412556 261 ntBASIC14.41□□□□□ -0.1
MMP13P45452 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP13P45452 AC116345.2-201ENST00000512837 523 ntBASIC14.41□□□□□ -0.1
MMP13P45452 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.41□□□□□ -0.1
MMP13P45452 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP13P45452 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
MMP13P45452 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.41□□□□□ -0.1
MMP13P45452 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 AC138969.2-201ENST00000532739 9932 ntBASIC14.41□□□□□ -0.1
MMP13P45452 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
MMP13P45452 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
MMP13P45452 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.41□□□□□ -0.1
MMP13P45452 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 PCDHA5-203ENST00000614258 4248 ntBASIC14.4□□□□□ -0.1
MMP13P45452 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MMP13P45452 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
MMP13P45452 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 PDIA3P2-201ENST00000428073 158 ntBASIC14.4□□□□□ -0.1
MMP13P45452 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP13P45452 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP13P45452 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP13P45452 AL109837.1-201ENST00000603272 613 ntBASIC14.4□□□□□ -0.1
MMP13P45452 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 AC067931.2-201ENST00000623655 2003 ntBASIC14.4□□□□□ -0.1
MMP13P45452 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP13P45452 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MMP13P45452 AC110048.1-201ENST00000604293 2157 ntBASIC14.4□□□□□ -0.1
MMP13P45452 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MMP13P45452 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP13P45452 AC022364.1-202ENST00000617468 2409 ntBASIC14.4□□□□□ -0.1
MMP13P45452 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 AL031595.1-201ENST00000623969 4709 ntBASIC14.39□□□□□ -0.11
MMP13P45452 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.39□□□□□ -0.11
MMP13P45452 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.39□□□□□ -0.11
MMP13P45452 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP13P45452 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MMP13P45452 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC14.39□□□□□ -0.11
MMP13P45452 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
MMP13P45452 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP13P45452 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms