Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GRIA1P42261 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GRIA1P42261 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14□□□□□ -0.17
GRIA1P42261 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
GRIA1P42261 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14□□□□□ -0.17
GRIA1P42261 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14□□□□□ -0.17
GRIA1P42261 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GRIA1P42261 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
GRIA1P42261 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
GRIA1P42261 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14□□□□□ -0.17
GRIA1P42261 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
GRIA1P42261 MIR1247-201ENST00000408206 136 ntBASIC14□□□□□ -0.17
GRIA1P42261 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14□□□□□ -0.17
GRIA1P42261 EEF1DP2-201ENST00000433698 843 ntBASIC14□□□□□ -0.17
GRIA1P42261 AKR7A2P1-201ENST00000460134 915 ntBASIC14□□□□□ -0.17
GRIA1P42261 RN7SL788P-201ENST00000460504 316 ntBASIC14□□□□□ -0.17
GRIA1P42261 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GRIA1P42261 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
GRIA1P42261 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
GRIA1P42261 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14□□□□□ -0.17
GRIA1P42261 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14□□□□□ -0.17
GRIA1P42261 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
GRIA1P42261 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14□□□□□ -0.17
GRIA1P42261 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14□□□□□ -0.17
GRIA1P42261 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14□□□□□ -0.17
GRIA1P42261 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14□□□□□ -0.17
GRIA1P42261 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14□□□□□ -0.17
GRIA1P42261 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
GRIA1P42261 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 OR2K2-202ENST00000374428 1038 ntBASIC13.99□□□□□ -0.17
GRIA1P42261 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.99□□□□□ -0.17
GRIA1P42261 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.99□□□□□ -0.17
GRIA1P42261 PDIA3P2-201ENST00000428073 158 ntBASIC13.99□□□□□ -0.17
GRIA1P42261 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.99□□□□□ -0.17
GRIA1P42261 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.99□□□□□ -0.17
GRIA1P42261 POU5F1P2-201ENST00000521750 823 ntBASIC13.99□□□□□ -0.17
GRIA1P42261 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.99□□□□□ -0.17
GRIA1P42261 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 AC026803.1-201ENST00000569130 274 ntBASIC13.99□□□□□ -0.17
GRIA1P42261 MIR4326-201ENST00000582203 59 ntBASIC13.99□□□□□ -0.17
GRIA1P42261 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 NDUFV2P1-201ENST00000596415 907 ntBASIC13.99□□□□□ -0.17
GRIA1P42261 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.99□□□□□ -0.17
GRIA1P42261 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GRIA1P42261 AC138028.6-201ENST00000616106 1482 ntBASIC13.99□□□□□ -0.17
GRIA1P42261 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GRIA1P42261 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.99□□□□□ -0.17
GRIA1P42261 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GRIA1P42261 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms