Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 E2F6P4-201ENST00000468625 514 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AP002383.2-201ENST00000545768 675 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 MIR4294-201ENST00000584548 76 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC130469.2-201ENST00000625112 1092 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 AC012358.2-201ENST00000430010 1434 ntBASIC12.43□□□□□ -0.42
CHD8Q9HCK8 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 HP-203ENST00000357763 1482 ntTSL 5 BASIC12.43□□□□□ -0.42
CHD8Q9HCK8 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AC010677.1-201ENST00000441690 412 ntBASIC12.42□□□□□ -0.42
CHD8Q9HCK8 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AC092471.2-201ENST00000637219 651 ntBASIC12.42□□□□□ -0.42
CHD8Q9HCK8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 KIR2DP1-201ENST00000415311 1331 ntBASIC12.42□□□□□ -0.42
CHD8Q9HCK8 ANXA3-209ENST00000512884 1335 ntTSL 5 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AC073089.1-201ENST00000457546 214 ntBASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AK2-208ENST00000487289 920 ntTSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AC087752.3-201ENST00000523905 709 ntTSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AC136475.6-201ENST00000533113 289 ntBASIC12.42□□□□□ -0.42
CHD8Q9HCK8 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 B2M-202ENST00000544417 933 ntTSL 5 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 DPPA5P4-201ENST00000559021 365 ntBASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 INTS4P1-203ENST00000641008 3683 ntBASIC12.42□□□□□ -0.42
CHD8Q9HCK8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 MKRN7P-201ENST00000433469 1371 ntBASIC12.42□□□□□ -0.42
CHD8Q9HCK8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CHD8Q9HCK8 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AL512288.2-201ENST00000426041 367 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AL929472.4-201ENST00000447422 691 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 RN7SL225P-201ENST00000464648 298 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 RN7SL328P-201ENST00000484033 300 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC12.41□□□□□ -0.42
CHD8Q9HCK8 AC104371.1-201ENST00000522077 797 ntBASIC12.41□□□□□ -0.42
CHD8Q9HCK8 OR7E14P-201ENST00000526721 1000 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms