Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 OR4A48P-201ENST00000531359 391 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC012467.1-201ENST00000607740 256 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 AL157813.1-201ENST00000612996 587 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC012653.2-201ENST00000621880 420 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC006453.1-201ENST00000636037 1257 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 KRT8P19-201ENST00000551916 1455 ntBASIC12.69□□□□□ -0.38
USB1Q9BQ65 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.69□□□□□ -0.38
USB1Q9BQ65 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USB1Q9BQ65 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC018629.1-201ENST00000623381 1736 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ELK2AP-201ENST00000392510 1007 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 KRT18P36-201ENST00000411618 1276 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC117434.1-201ENST00000419971 836 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AL133417.1-201ENST00000425290 688 ntTSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 NUP210P1-202ENST00000504322 710 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC008723.1-201ENST00000506922 207 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 RHOQP1-201ENST00000555758 579 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 SORD2P-201ENST00000558556 1069 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC239803.2-201ENST00000610161 430 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 LINC01783-202ENST00000614408 828 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 MIR6769A-201ENST00000617340 73 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 BX284668.2-205ENST00000619677 828 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC090386.2-201ENST00000623010 1039 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC104820.1-201ENST00000624183 307 ntBASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USB1Q9BQ65 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.68□□□□□ -0.38
USB1Q9BQ65 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms