Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.21■□□□□ 0.19
STAG1Q8WVM7 AC138466.5-201ENST00000624002 808 ntBASIC16.21■□□□□ 0.19
STAG1Q8WVM7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
STAG1Q8WVM7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
STAG1Q8WVM7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
STAG1Q8WVM7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.21■□□□□ 0.18
STAG1Q8WVM7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 AC092115.1-201ENST00000566277 1402 ntBASIC16.2■□□□□ 0.18
STAG1Q8WVM7 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 MSNP1-201ENST00000511640 1732 ntBASIC16.2■□□□□ 0.18
STAG1Q8WVM7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 AC041040.1-201ENST00000425197 460 ntBASIC16.2■□□□□ 0.18
STAG1Q8WVM7 GULOP-201ENST00000454030 748 ntBASIC16.2■□□□□ 0.18
STAG1Q8WVM7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 LINC00634-202ENST00000505157 222 ntBASIC16.2■□□□□ 0.18
STAG1Q8WVM7 AC084752.1-201ENST00000509766 622 ntBASIC16.2■□□□□ 0.18
STAG1Q8WVM7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 AC026120.2-201ENST00000617239 309 ntBASIC16.2■□□□□ 0.18
STAG1Q8WVM7 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 AL445250.1-201ENST00000641671 2259 ntBASIC16.2■□□□□ 0.18
STAG1Q8WVM7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
STAG1Q8WVM7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 AC021305.1-201ENST00000520656 1514 ntBASIC16.19■□□□□ 0.18
STAG1Q8WVM7 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 AL365181.1-201ENST00000564032 1828 ntBASIC16.19■□□□□ 0.18
STAG1Q8WVM7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 GNG10P1-201ENST00000452289 199 ntBASIC16.19■□□□□ 0.18
STAG1Q8WVM7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 RN7SL818P-201ENST00000485099 259 ntBASIC16.19■□□□□ 0.18
STAG1Q8WVM7 AC093826.1-201ENST00000508655 993 ntBASIC16.19■□□□□ 0.18
STAG1Q8WVM7 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 SAA2-206ENST00000530400 323 ntTSL 3 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 RN7SL725P-201ENST00000606439 259 ntBASIC16.19■□□□□ 0.18
STAG1Q8WVM7 AL118522.1-201ENST00000611368 560 ntBASIC16.19■□□□□ 0.18
STAG1Q8WVM7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.19■□□□□ 0.18
STAG1Q8WVM7 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms