Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AL355102.3-201ENST00000554299 1678 ntBASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 MKRN5P-201ENST00000445263 1467 ntBASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AC025183.3-201ENST00000623526 1482 ntBASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 BTBD6P1-201ENST00000412176 1267 ntBASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 HLA-J-204ENST00000495278 958 ntBASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 RN7SL560P-201ENST00000577943 264 ntBASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 COX11-210ENST00000639671 696 ntBASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AC008620.2-201ENST00000510294 1569 ntBASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC50Q8IVM0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 RPL13AP3-202ENST00000494676 1473 ntBASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 LINC01165-201ENST00000445190 1623 ntBASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 AC022210.1-201ENST00000449856 793 ntBASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 AC108024.1-201ENST00000626286 1721 ntBASIC14.71□□□□□ -0.05
CCDC50Q8IVM0 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms