Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 RN7SL827P-201ENST00000607480 288 ntBASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
VPS13DQ5THJ4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC8.84□□□□□ -1
VPS13DQ5THJ4 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC8.84□□□□□ -1
VPS13DQ5THJ4 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 KRT127P-201ENST00000547183 433 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC005336.1-201ENST00000585431 1243 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC067852.6-201ENST00000591237 1736 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AP000897.1-201ENST00000584036 1613 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC008040.3-201ENST00000493762 1232 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 HNRNPA1P7-201ENST00000521273 963 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC245884.8-201ENST00000599382 880 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 OR2T32P-201ENST00000403423 963 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 AL928921.2-201ENST00000641325 2442 ntBASIC8.83□□□□□ -1
VPS13DQ5THJ4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC8.83□□□□□ -1
VPS13DQ5THJ4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC8.83□□□□□ -1
VPS13DQ5THJ4 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 MTND6P7-201ENST00000433237 524 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 RN7SL43P-201ENST00000463926 291 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 OR2A1-AS1-203ENST00000468575 568 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 RBM22P2-201ENST00000393978 1814 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
VPS13DQ5THJ4 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 BEND3P3-201ENST00000611030 2440 ntBASIC8.82□□□□□ -1
VPS13DQ5THJ4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
VPS13DQ5THJ4 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms