Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 AC010632.2-201ENST00000588369 1224 ntBASIC18.61■□□□□ 0.57
CGNL1Q0VF96 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC18.61■□□□□ 0.57
CGNL1Q0VF96 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 NIN-202ENST00000324330 4364 ntTSL 5 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGNL1Q0VF96 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AL109809.1-201ENST00000418979 1367 ntBASIC18.6■□□□□ 0.57
CGNL1Q0VF96 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AL391647.1-201ENST00000395664 511 ntBASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AC026470.1-201ENST00000478038 846 ntBASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AC104212.2-201ENST00000478813 628 ntBASIC18.6■□□□□ 0.57
CGNL1Q0VF96 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AC006548.2-201ENST00000605217 529 ntBASIC18.6■□□□□ 0.57
CGNL1Q0VF96 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.6■□□□□ 0.57
CGNL1Q0VF96 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 OR51A9P-201ENST00000422578 911 ntBASIC18.59■□□□□ 0.57
CGNL1Q0VF96 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 AC092903.1-201ENST00000466506 262 ntBASIC18.59■□□□□ 0.57
CGNL1Q0VF96 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 FAM187B2P-201ENST00000577135 713 ntBASIC18.59■□□□□ 0.57
CGNL1Q0VF96 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CGNL1Q0VF96 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms