Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC14.39□□□□□ -0.11
CBX1P83916 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CBX1P83916 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC14.39□□□□□ -0.11
CBX1P83916 AC245140.2-201ENST00000624054 1939 ntBASIC14.39□□□□□ -0.11
CBX1P83916 TACC2-201ENST00000260733 3644 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CBX1P83916 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 AL606970.1-201ENST00000445442 2559 ntTSL 3 BASIC14.38□□□□□ -0.11
CBX1P83916 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.38□□□□□ -0.11
CBX1P83916 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 BCAS3-202ENST00000407086 3496 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CBX1P83916 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.38□□□□□ -0.11
CBX1P83916 GAPDHP40-201ENST00000505218 1006 ntBASIC14.38□□□□□ -0.11
CBX1P83916 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 BANF1P1-201ENST00000553684 263 ntBASIC14.38□□□□□ -0.11
CBX1P83916 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 AC000095.1-201ENST00000603208 874 ntBASIC14.38□□□□□ -0.11
CBX1P83916 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
CBX1P83916 AC116407.3-201ENST00000623905 1129 ntBASIC14.38□□□□□ -0.11
CBX1P83916 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 AC073578.3-201ENST00000624926 4191 ntBASIC14.38□□□□□ -0.11
CBX1P83916 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 AKAP8P1-201ENST00000434743 1349 ntBASIC14.38□□□□□ -0.11
CBX1P83916 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC14.38□□□□□ -0.11
CBX1P83916 ENPP5-201ENST00000230565 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CBX1P83916 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC14.38□□□□□ -0.11
CBX1P83916 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CBX1P83916 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CBX1P83916 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC14.37□□□□□ -0.11
CBX1P83916 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CBX1P83916 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CBX1P83916 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CBX1P83916 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CBX1P83916 VRTN-201ENST00000256362 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CBX1P83916 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CBX1P83916 AC092117.2-201ENST00000623937 1659 ntBASIC14.37□□□□□ -0.11
CBX1P83916 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 CLIP3-201ENST00000360535 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 EMBP1-201ENST00000458200 901 ntBASIC14.37□□□□□ -0.11
CBX1P83916 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.37□□□□□ -0.11
CBX1P83916 AC074386.1-202ENST00000463561 864 ntBASIC14.37□□□□□ -0.11
CBX1P83916 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.37□□□□□ -0.11
CBX1P83916 HLA-J-203ENST00000494367 1087 ntBASIC14.37□□□□□ -0.11
CBX1P83916 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.37□□□□□ -0.11
CBX1P83916 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CBX1P83916 AC105021.1-202ENST00000570572 669 ntBASIC14.37□□□□□ -0.11
CBX1P83916 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.37□□□□□ -0.11
CBX1P83916 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CBX1P83916 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CBX1P83916 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.37□□□□□ -0.11
CBX1P83916 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms