Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RAE1P78406 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.09□□□□□ -0.31
RAE1P78406 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RAE1P78406 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
RAE1P78406 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.09□□□□□ -0.31
RAE1P78406 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 CALR4P-201ENST00000431943 946 ntBASIC13.09□□□□□ -0.31
RAE1P78406 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.09□□□□□ -0.31
RAE1P78406 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.09□□□□□ -0.31
RAE1P78406 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RAE1P78406 SCARNA12-201ENST00000459155 270 ntBASIC13.09□□□□□ -0.31
RAE1P78406 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.09□□□□□ -0.31
RAE1P78406 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RAE1P78406 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.09□□□□□ -0.31
RAE1P78406 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.09□□□□□ -0.31
RAE1P78406 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.09□□□□□ -0.31
RAE1P78406 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.09□□□□□ -0.31
RAE1P78406 SIGLEC22P-201ENST00000599104 714 ntBASIC13.09□□□□□ -0.31
RAE1P78406 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.09□□□□□ -0.31
RAE1P78406 AL353770.1-201ENST00000614915 403 ntBASIC13.09□□□□□ -0.31
RAE1P78406 AC091769.1-201ENST00000619576 568 ntBASIC13.09□□□□□ -0.31
RAE1P78406 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 AGGF1P10-201ENST00000635005 2191 ntBASIC13.09□□□□□ -0.31
RAE1P78406 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
RAE1P78406 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.09□□□□□ -0.31
RAE1P78406 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RAE1P78406 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAE1P78406 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RAE1P78406 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.09□□□□□ -0.31
RAE1P78406 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAE1P78406 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAE1P78406 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.08□□□□□ -0.31
RAE1P78406 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RAE1P78406 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RAE1P78406 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.08□□□□□ -0.32
RAE1P78406 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RAE1P78406 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RAE1P78406 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 RPL8P2-201ENST00000430538 502 ntBASIC13.08□□□□□ -0.32
RAE1P78406 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.08□□□□□ -0.32
RAE1P78406 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.08□□□□□ -0.32
RAE1P78406 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.08□□□□□ -0.32
RAE1P78406 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.08□□□□□ -0.32
RAE1P78406 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.08□□□□□ -0.32
RAE1P78406 MIR3619-201ENST00000579667 83 ntBASIC13.08□□□□□ -0.32
RAE1P78406 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.08□□□□□ -0.32
RAE1P78406 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.08□□□□□ -0.32
RAE1P78406 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 IL9RP3-201ENST00000442856 1674 ntBASIC13.08□□□□□ -0.32
RAE1P78406 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.08□□□□□ -0.32
RAE1P78406 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.08□□□□□ -0.32
RAE1P78406 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAE1P78406 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
RAE1P78406 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 ODCP-201ENST00000459650 1639 ntBASIC13.07□□□□□ -0.32
RAE1P78406 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAE1P78406 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RAE1P78406 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms