Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 HNRNPA1P30-202ENST00000440699 997 ntBASIC14.8□□□□□ -0.04
BRCA2P51587 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
BRCA2P51587 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC14.8□□□□□ -0.04
BRCA2P51587 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC14.8□□□□□ -0.04
BRCA2P51587 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 FAM90A22P-201ENST00000400142 1395 ntBASIC14.8□□□□□ -0.04
BRCA2P51587 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 SERF2-205ENST00000403425 690 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.8□□□□□ -0.04
BRCA2P51587 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC14.8□□□□□ -0.04
BRCA2P51587 AC007992.1-201ENST00000513953 953 ntBASIC14.8□□□□□ -0.04
BRCA2P51587 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 AC131274.3-201ENST00000578745 1271 ntBASIC14.8□□□□□ -0.04
BRCA2P51587 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC14.8□□□□□ -0.04
BRCA2P51587 AP000553.2-201ENST00000609038 441 ntBASIC14.8□□□□□ -0.04
BRCA2P51587 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
BRCA2P51587 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC14.8□□□□□ -0.04
BRCA2P51587 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
BRCA2P51587 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.8□□□□□ -0.04
BRCA2P51587 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BRCA2P51587 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BRCA2P51587 CMC2-202ENST00000486645 766 ntTSL 3 BASIC14.79□□□□□ -0.04
BRCA2P51587 OR10V2P-201ENST00000525296 764 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 MIR3940-201ENST00000579148 102 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
BRCA2P51587 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BRCA2P51587 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
BRCA2P51587 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 MED20-204ENST00000409312 932 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCA2P51587 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC14.79□□□□□ -0.04
BRCA2P51587 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC14.79□□□□□ -0.04
BRCA2P51587 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCA2P51587 AL606834.1-201ENST00000553836 1169 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 AC244102.2-201ENST00000597568 955 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCA2P51587 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCA2P51587 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC14.79□□□□□ -0.04
BRCA2P51587 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
BRCA2P51587 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 AC015959.1-201ENST00000623263 1377 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.79□□□□□ -0.04
BRCA2P51587 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCA2P51587 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCA2P51587 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC14.79□□□□□ -0.04
BRCA2P51587 AC233724.7-201ENST00000511476 253 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 SNORA74.2-201ENST00000516496 180 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC14.79□□□□□ -0.04
BRCA2P51587 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC14.79□□□□□ -0.04
BRCA2P51587 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC14.79□□□□□ -0.04
BRCA2P51587 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC14.79□□□□□ -0.04
BRCA2P51587 AC025165.4-201ENST00000602327 433 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 AZU1P1-201ENST00000603479 385 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 RN7SL341P-201ENST00000613745 298 ntBASIC14.79□□□□□ -0.04
BRCA2P51587 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
BRCA2P51587 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRCA2P51587 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCA2P51587 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
BRCA2P51587 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCA2P51587 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC14.78□□□□□ -0.04
BRCA2P51587 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
BRCA2P51587 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC14.78□□□□□ -0.04
BRCA2P51587 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCA2P51587 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC14.78□□□□□ -0.04
BRCA2P51587 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.78□□□□□ -0.04
BRCA2P51587 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRCA2P51587 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms