Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CRIP1P2-201ENST00000425396 228 ntBASIC18.15■□□□□ 0.5
USP6P35125 ASLP1-201ENST00000428790 637 ntBASIC18.15■□□□□ 0.5
USP6P35125 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC18.15■□□□□ 0.5
USP6P35125 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC18.15■□□□□ 0.5
USP6P35125 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 AC103724.2-201ENST00000520355 476 ntBASIC18.15■□□□□ 0.5
USP6P35125 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC18.15■□□□□ 0.5
USP6P35125 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC18.15■□□□□ 0.5
USP6P35125 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
USP6P35125 AC012146.4-201ENST00000575546 271 ntBASIC18.15■□□□□ 0.5
USP6P35125 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC18.14■□□□□ 0.5
USP6P35125 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.14■□□□□ 0.49
USP6P35125 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
USP6P35125 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
USP6P35125 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.14■□□□□ 0.49
USP6P35125 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USP6P35125 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC18.14■□□□□ 0.49
USP6P35125 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 Z98259.1-201ENST00000564261 1697 ntBASIC18.14■□□□□ 0.49
USP6P35125 DLX4-206ENST00000611342 1662 ntBASIC18.14■□□□□ 0.49
USP6P35125 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
USP6P35125 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 POP5-201ENST00000341039 913 ntTSL 2 BASIC18.14■□□□□ 0.49
USP6P35125 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC18.14■□□□□ 0.49
USP6P35125 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
USP6P35125 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
USP6P35125 AC067942.1-202ENST00000471756 1057 ntBASIC18.14■□□□□ 0.49
USP6P35125 HNRNPA1P55-201ENST00000505935 955 ntBASIC18.14■□□□□ 0.49
USP6P35125 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC18.14■□□□□ 0.49
USP6P35125 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC18.14■□□□□ 0.49
USP6P35125 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
USP6P35125 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC18.14■□□□□ 0.49
USP6P35125 AL590556.2-202ENST00000636906 844 ntBASIC18.14■□□□□ 0.49
USP6P35125 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP6P35125 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 HNRNPLP1-201ENST00000421896 1501 ntBASIC18.13■□□□□ 0.49
USP6P35125 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
USP6P35125 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC18.13■□□□□ 0.49
USP6P35125 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 OR7E12P-201ENST00000344740 973 ntBASIC18.13■□□□□ 0.49
USP6P35125 MIR324-201ENST00000362183 83 ntBASIC18.13■□□□□ 0.49
USP6P35125 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 SERF2-205ENST00000403425 690 ntTSL 2 BASIC18.13■□□□□ 0.49
USP6P35125 CACYBPP3-201ENST00000406011 625 ntBASIC18.13■□□□□ 0.49
USP6P35125 AC005822.1-201ENST00000414124 1034 ntBASIC18.13■□□□□ 0.49
USP6P35125 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC18.13■□□□□ 0.49
USP6P35125 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 ACTG1P23-201ENST00000437653 1074 ntBASIC18.13■□□□□ 0.49
USP6P35125 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC18.13■□□□□ 0.49
USP6P35125 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC18.13■□□□□ 0.49
USP6P35125 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 RN7SL838P-201ENST00000481676 295 ntBASIC18.13■□□□□ 0.49
USP6P35125 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
USP6P35125 CETN3-205ENST00000522842 664 ntTSL 2 BASIC18.13■□□□□ 0.49
USP6P35125 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC18.13■□□□□ 0.49
USP6P35125 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 METTL23-211ENST00000589977 617 ntTSL 3 BASIC18.13■□□□□ 0.49
USP6P35125 EMP3-204ENST00000596315 761 ntTSL 2 BASIC18.13■□□□□ 0.49
USP6P35125 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC18.13■□□□□ 0.49
USP6P35125 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC18.13■□□□□ 0.49
USP6P35125 AC009812.1-201ENST00000605948 1059 ntBASIC18.13■□□□□ 0.49
USP6P35125 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 COG6-212ENST00000630730 186 ntTSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 AL031590.1-202ENST00000641466 1737 ntBASIC18.13■□□□□ 0.49
USP6P35125 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP6P35125 AL359845.1-201ENST00000458202 1648 ntBASIC18.13■□□□□ 0.49
USP6P35125 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
USP6P35125 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP6P35125 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
USP6P35125 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC18.12■□□□□ 0.49
USP6P35125 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms