Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RXRBP28702 PYY3-201ENST00000419078 213 ntBASIC17.47■□□□□ 0.39
RXRBP28702 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 AC106748.1-201ENST00000454801 384 ntBASIC17.47■□□□□ 0.39
RXRBP28702 LINC00332-201ENST00000455241 834 ntTSL 3 BASIC17.47■□□□□ 0.39
RXRBP28702 SSR3-202ENST00000463503 596 ntTSL 4 BASIC17.47■□□□□ 0.39
RXRBP28702 RN7SL309P-201ENST00000491364 286 ntBASIC17.47■□□□□ 0.39
RXRBP28702 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RXRBP28702 AP003717.2-201ENST00000534962 898 ntBASIC17.47■□□□□ 0.39
RXRBP28702 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 AL662907.1-201ENST00000622988 1360 ntBASIC17.47■□□□□ 0.39
RXRBP28702 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.47■□□□□ 0.39
RXRBP28702 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RXRBP28702 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
RXRBP28702 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.47■□□□□ 0.39
RXRBP28702 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RXRBP28702 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.47■□□□□ 0.39
RXRBP28702 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RXRBP28702 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
RXRBP28702 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.46■□□□□ 0.39
RXRBP28702 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.46■□□□□ 0.39
RXRBP28702 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.46■□□□□ 0.39
RXRBP28702 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 CYP2B7P-201ENST00000541697 1476 ntBASIC17.46■□□□□ 0.39
RXRBP28702 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.46■□□□□ 0.39
RXRBP28702 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC17.46■□□□□ 0.39
RXRBP28702 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC17.46■□□□□ 0.39
RXRBP28702 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC17.46■□□□□ 0.39
RXRBP28702 DERL1-204ENST00000519018 575 ntTSL 4 BASIC17.46■□□□□ 0.39
RXRBP28702 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC17.46■□□□□ 0.39
RXRBP28702 SLIRP-209ENST00000557342 408 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC17.46■□□□□ 0.39
RXRBP28702 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC17.46■□□□□ 0.39
RXRBP28702 HKR1-222ENST00000591417 525 ntTSL 4 BASIC17.46■□□□□ 0.39
RXRBP28702 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 C2orf27AP1-201ENST00000618128 586 ntBASIC17.46■□□□□ 0.39
RXRBP28702 SPDL1-216ENST00000629457 340 ntTSL 5 BASIC17.46■□□□□ 0.39
RXRBP28702 FRG2EP-201ENST00000634243 835 ntBASIC17.46■□□□□ 0.39
RXRBP28702 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC17.46■□□□□ 0.39
RXRBP28702 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RXRBP28702 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 AC073488.1-201ENST00000416620 1600 ntBASIC17.46■□□□□ 0.39
RXRBP28702 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.46■□□□□ 0.39
RXRBP28702 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RXRBP28702 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RXRBP28702 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RXRBP28702 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RXRBP28702 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.45■□□□□ 0.38
RXRBP28702 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.45■□□□□ 0.38
RXRBP28702 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 RCC2P1-201ENST00000452257 1476 ntBASIC17.45■□□□□ 0.38
RXRBP28702 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.45■□□□□ 0.38
RXRBP28702 GPR141-201ENST00000334425 918 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RXRBP28702 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC17.45■□□□□ 0.38
RXRBP28702 AKR1B1P4-201ENST00000426552 922 ntBASIC17.45■□□□□ 0.38
RXRBP28702 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RXRBP28702 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC17.45■□□□□ 0.38
RXRBP28702 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC17.45■□□□□ 0.38
RXRBP28702 TINF2-210ENST00000559019 885 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RXRBP28702 AC109460.2-202ENST00000568057 573 ntTSL 3 BASIC17.45■□□□□ 0.38
RXRBP28702 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC17.45■□□□□ 0.38
RXRBP28702 AC007378.1-201ENST00000609765 478 ntBASIC17.45■□□□□ 0.38
RXRBP28702 AC009118.3-201ENST00000622896 873 ntBASIC17.45■□□□□ 0.38
RXRBP28702 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RXRBP28702 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.45■□□□□ 0.38
RXRBP28702 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC17.45■□□□□ 0.38
RXRBP28702 TEX101-203ENST00000602198 1446 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
RXRBP28702 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RXRBP28702 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC17.45■□□□□ 0.38
RXRBP28702 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RXRBP28702 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms