Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 MARK2P9-201ENST00000430958 1727 ntBASIC13.78□□□□□ -0.2
VARSP26640 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VARSP26640 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.77□□□□□ -0.2
VARSP26640 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
VARSP26640 AP002761.4-201ENST00000565433 3361 ntBASIC13.77□□□□□ -0.2
VARSP26640 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VARSP26640 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.77□□□□□ -0.21
VARSP26640 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.77□□□□□ -0.21
VARSP26640 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC13.77□□□□□ -0.21
VARSP26640 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
VARSP26640 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 AK2P2-201ENST00000439142 405 ntBASIC13.77□□□□□ -0.21
VARSP26640 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 AL596276.2-201ENST00000447525 331 ntBASIC13.77□□□□□ -0.21
VARSP26640 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 RCC2P8-201ENST00000502779 1035 ntBASIC13.77□□□□□ -0.21
VARSP26640 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 MIR497HG-202ENST00000572453 3838 ntBASIC13.77□□□□□ -0.21
VARSP26640 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
VARSP26640 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.77□□□□□ -0.21
VARSP26640 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.77□□□□□ -0.21
VARSP26640 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VARSP26640 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 PEG13-201ENST00000631594 5667 ntBASIC13.77□□□□□ -0.21
VARSP26640 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
VARSP26640 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VARSP26640 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
VARSP26640 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VARSP26640 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.76□□□□□ -0.21
VARSP26640 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VARSP26640 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.76□□□□□ -0.21
VARSP26640 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VARSP26640 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.76□□□□□ -0.21
VARSP26640 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VARSP26640 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.76□□□□□ -0.21
VARSP26640 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
VARSP26640 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.76□□□□□ -0.21
VARSP26640 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.76□□□□□ -0.21
VARSP26640 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.76□□□□□ -0.21
VARSP26640 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.76□□□□□ -0.21
VARSP26640 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.76□□□□□ -0.21
VARSP26640 USP9YP2-201ENST00000504503 1000 ntBASIC13.76□□□□□ -0.21
VARSP26640 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VARSP26640 MARK2P5-201ENST00000507649 634 ntBASIC13.76□□□□□ -0.21
VARSP26640 USP9YP1-201ENST00000513521 1002 ntBASIC13.76□□□□□ -0.21
VARSP26640 AC024681.1-201ENST00000521917 487 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms