Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC11.71□□□□□ -0.53
COL8A2P25067 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.71□□□□□ -0.53
COL8A2P25067 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC11.71□□□□□ -0.53
COL8A2P25067 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC11.71□□□□□ -0.53
COL8A2P25067 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC11.71□□□□□ -0.53
COL8A2P25067 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC11.71□□□□□ -0.53
COL8A2P25067 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC11.71□□□□□ -0.53
COL8A2P25067 BATF-202ENST00000555504 361 ntTSL 2 BASIC11.71□□□□□ -0.53
COL8A2P25067 MIR5196-201ENST00000578146 115 ntBASIC11.71□□□□□ -0.53
COL8A2P25067 AL118522.1-201ENST00000611368 560 ntBASIC11.71□□□□□ -0.53
COL8A2P25067 AC138466.5-201ENST00000624002 808 ntBASIC11.71□□□□□ -0.53
COL8A2P25067 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC11.71□□□□□ -0.53
COL8A2P25067 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
COL8A2P25067 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
COL8A2P25067 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.71□□□□□ -0.54
COL8A2P25067 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
COL8A2P25067 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
COL8A2P25067 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
COL8A2P25067 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.71□□□□□ -0.54
COL8A2P25067 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
COL8A2P25067 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
COL8A2P25067 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.71□□□□□ -0.54
COL8A2P25067 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.71□□□□□ -0.54
COL8A2P25067 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.71□□□□□ -0.54
COL8A2P25067 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
COL8A2P25067 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
COL8A2P25067 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC11.7□□□□□ -0.54
COL8A2P25067 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
COL8A2P25067 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
COL8A2P25067 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.7□□□□□ -0.54
COL8A2P25067 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC11.7□□□□□ -0.54
COL8A2P25067 PES1P2-201ENST00000449745 1735 ntBASIC11.7□□□□□ -0.54
COL8A2P25067 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
COL8A2P25067 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC11.7□□□□□ -0.54
COL8A2P25067 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC11.7□□□□□ -0.54
COL8A2P25067 ACTG1P19-201ENST00000418987 1116 ntBASIC11.7□□□□□ -0.54
COL8A2P25067 AC108734.2-201ENST00000420887 1069 ntBASIC11.7□□□□□ -0.54
COL8A2P25067 AC005722.1-201ENST00000431878 964 ntBASIC11.7□□□□□ -0.54
COL8A2P25067 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC11.7□□□□□ -0.54
COL8A2P25067 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC11.7□□□□□ -0.54
COL8A2P25067 ALG1L6P-201ENST00000515248 758 ntBASIC11.7□□□□□ -0.54
COL8A2P25067 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC11.7□□□□□ -0.54
COL8A2P25067 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC11.7□□□□□ -0.54
COL8A2P25067 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC11.7□□□□□ -0.54
COL8A2P25067 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
COL8A2P25067 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.7□□□□□ -0.54
COL8A2P25067 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
COL8A2P25067 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
COL8A2P25067 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.7□□□□□ -0.54
COL8A2P25067 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
COL8A2P25067 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
COL8A2P25067 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.7□□□□□ -0.54
COL8A2P25067 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.7□□□□□ -0.54
COL8A2P25067 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 DDC-204ENST00000426377 1700 ntTSL 3 BASIC11.69□□□□□ -0.54
COL8A2P25067 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 CTBP2P8-201ENST00000422584 1330 ntBASIC11.69□□□□□ -0.54
COL8A2P25067 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms