Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
NR4A1P22736 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NR4A1P22736 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NR4A1P22736 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NR4A1P22736 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NR4A1P22736 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NR4A1P22736 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NR4A1P22736 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.99□□□□□ -0.33
NR4A1P22736 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 CLUHP2-201ENST00000426660 1303 ntBASIC12.98□□□□□ -0.33
NR4A1P22736 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.98□□□□□ -0.33
NR4A1P22736 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.98□□□□□ -0.33
NR4A1P22736 BNIP3P42-201ENST00000454982 569 ntBASIC12.98□□□□□ -0.33
NR4A1P22736 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.98□□□□□ -0.33
NR4A1P22736 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 FTLP10-202ENST00000505798 471 ntBASIC12.98□□□□□ -0.33
NR4A1P22736 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.98□□□□□ -0.33
NR4A1P22736 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.98□□□□□ -0.33
NR4A1P22736 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
NR4A1P22736 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.98□□□□□ -0.33
NR4A1P22736 BNIP3P29-201ENST00000598302 571 ntBASIC12.98□□□□□ -0.33
NR4A1P22736 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 AC011447.5-201ENST00000616168 564 ntBASIC12.98□□□□□ -0.33
NR4A1P22736 AC138466.3-201ENST00000619983 221 ntBASIC12.98□□□□□ -0.33
NR4A1P22736 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 ABCD1P2-201ENST00000429313 1601 ntBASIC12.98□□□□□ -0.33
NR4A1P22736 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.98□□□□□ -0.33
NR4A1P22736 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.98□□□□□ -0.33
NR4A1P22736 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NR4A1P22736 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC12.97□□□□□ -0.33
NR4A1P22736 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.97□□□□□ -0.33
NR4A1P22736 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NR4A1P22736 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NR4A1P22736 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.97□□□□□ -0.33
NR4A1P22736 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
NR4A1P22736 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NR4A1P22736 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.97□□□□□ -0.33
NR4A1P22736 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.97□□□□□ -0.33
NR4A1P22736 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.97□□□□□ -0.33
NR4A1P22736 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
NR4A1P22736 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
NR4A1P22736 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms