Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR1AP08908 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR1AP08908 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.65□□□□□ -0.38
HTR1AP08908 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HTR1AP08908 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
HTR1AP08908 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR1AP08908 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HTR1AP08908 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.65□□□□□ -0.38
HTR1AP08908 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HTR1AP08908 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
HTR1AP08908 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
HTR1AP08908 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
HTR1AP08908 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HTR1AP08908 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HTR1AP08908 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HTR1AP08908 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 C2orf27AP3-201ENST00000434123 579 ntBASIC12.64□□□□□ -0.39
HTR1AP08908 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 RNA5SP486-201ENST00000515961 83 ntBASIC12.64□□□□□ -0.39
HTR1AP08908 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.64□□□□□ -0.39
HTR1AP08908 AC010319.3-201ENST00000597028 470 ntBASIC12.64□□□□□ -0.39
HTR1AP08908 AL354718.3-201ENST00000616414 581 ntBASIC12.64□□□□□ -0.39
HTR1AP08908 CR382287.1-201ENST00000623954 586 ntBASIC12.64□□□□□ -0.39
HTR1AP08908 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.64□□□□□ -0.39
HTR1AP08908 POM121L7P-201ENST00000329949 2404 ntBASIC12.64□□□□□ -0.39
HTR1AP08908 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HTR1AP08908 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.64□□□□□ -0.39
HTR1AP08908 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.64□□□□□ -0.39
HTR1AP08908 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
HTR1AP08908 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.64□□□□□ -0.39
HTR1AP08908 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
HTR1AP08908 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.64□□□□□ -0.39
HTR1AP08908 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HTR1AP08908 AL008718.2-201ENST00000609206 1313 ntBASIC12.63□□□□□ -0.39
HTR1AP08908 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.63□□□□□ -0.39
HTR1AP08908 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 AL354989.2-201ENST00000435838 1540 ntBASIC12.63□□□□□ -0.39
HTR1AP08908 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.63□□□□□ -0.39
HTR1AP08908 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.63□□□□□ -0.39
HTR1AP08908 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HTR1AP08908 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.63□□□□□ -0.39
HTR1AP08908 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.63□□□□□ -0.39
HTR1AP08908 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HTR1AP08908 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms