Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM3P06753 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM3P06753 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC15.58■□□□□ 0.09
TPM3P06753 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM3P06753 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TPM3P06753 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TPM3P06753 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TPM3P06753 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC15.58■□□□□ 0.09
TPM3P06753 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM3P06753 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM3P06753 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM3P06753 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM3P06753 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TPM3P06753 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.58■□□□□ 0.08
TPM3P06753 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
TPM3P06753 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.58■□□□□ 0.08
TPM3P06753 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.58■□□□□ 0.08
TPM3P06753 AC139530.3-201ENST00000620344 690 ntBASIC15.58■□□□□ 0.08
TPM3P06753 AL591163.1-201ENST00000641757 987 ntBASIC15.58■□□□□ 0.08
TPM3P06753 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC15.58■□□□□ 0.08
TPM3P06753 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TPM3P06753 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TPM3P06753 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TPM3P06753 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
TPM3P06753 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TPM3P06753 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TPM3P06753 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.57■□□□□ 0.08
TPM3P06753 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TPM3P06753 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TPM3P06753 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TPM3P06753 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM3P06753 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM3P06753 GOLGA2P8-201ENST00000505201 779 ntBASIC15.57■□□□□ 0.08
TPM3P06753 PPY2P-201ENST00000582808 702 ntBASIC15.57■□□□□ 0.08
TPM3P06753 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM3P06753 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.57■□□□□ 0.08
TPM3P06753 LINC02560-201ENST00000596379 459 ntBASIC15.57■□□□□ 0.08
TPM3P06753 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM3P06753 AC009884.2-201ENST00000603110 324 ntBASIC15.57■□□□□ 0.08
TPM3P06753 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.57■□□□□ 0.08
TPM3P06753 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TPM3P06753 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TPM3P06753 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
TPM3P06753 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TPM3P06753 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TPM3P06753 AL139158.3-201ENST00000641212 1562 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms