Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC14.46□□□□□ -0.09
RB1P06400 RPSAP6-201ENST00000417882 882 ntBASIC14.46□□□□□ -0.09
RB1P06400 ACTG1P23-201ENST00000437653 1074 ntBASIC14.46□□□□□ -0.09
RB1P06400 AC007679.1-201ENST00000458609 502 ntBASIC14.46□□□□□ -0.09
RB1P06400 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RB1P06400 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.46□□□□□ -0.09
RB1P06400 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC14.46□□□□□ -0.09
RB1P06400 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC14.46□□□□□ -0.09
RB1P06400 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC14.46□□□□□ -0.09
RB1P06400 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC14.46□□□□□ -0.09
RB1P06400 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC14.46□□□□□ -0.09
RB1P06400 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RB1P06400 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC14.46□□□□□ -0.09
RB1P06400 AC005865.2-202ENST00000635814 725 ntBASIC14.46□□□□□ -0.09
RB1P06400 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 AL136379.1-201ENST00000623471 2642 ntBASIC14.46□□□□□ -0.09
RB1P06400 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RB1P06400 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.46□□□□□ -0.09
RB1P06400 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RB1P06400 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RB1P06400 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RB1P06400 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.46□□□□□ -0.1
RB1P06400 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RB1P06400 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.46□□□□□ -0.1
RB1P06400 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RB1P06400 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RB1P06400 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RB1P06400 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RB1P06400 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.46□□□□□ -0.1
RB1P06400 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 FMO6P-201ENST00000236166 1620 ntBASIC14.45□□□□□ -0.1
RB1P06400 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 AC106881.1-201ENST00000605849 3329 ntBASIC14.45□□□□□ -0.1
RB1P06400 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RB1P06400 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.45□□□□□ -0.1
RB1P06400 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RB1P06400 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.45□□□□□ -0.1
RB1P06400 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 RFNG-202ENST00000429557 994 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 HNRNPA1P3-201ENST00000440968 551 ntBASIC14.45□□□□□ -0.1
RB1P06400 RN7SL846P-201ENST00000467429 292 ntBASIC14.45□□□□□ -0.1
RB1P06400 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RB1P06400 AC022447.5-201ENST00000504817 392 ntBASIC14.45□□□□□ -0.1
RB1P06400 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.45□□□□□ -0.1
RB1P06400 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.45□□□□□ -0.1
RB1P06400 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.45□□□□□ -0.1
RB1P06400 AC142086.5-202ENST00000562500 217 ntBASIC14.45□□□□□ -0.1
RB1P06400 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.45□□□□□ -0.1
RB1P06400 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC14.45□□□□□ -0.1
RB1P06400 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.45□□□□□ -0.1
RB1P06400 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 MDC1-209ENST00000613547 830 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RB1P06400 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.45□□□□□ -0.1
RB1P06400 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RB1P06400 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.45□□□□□ -0.1
RB1P06400 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RB1P06400 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 RCC2P5-201ENST00000492126 1487 ntBASIC14.44□□□□□ -0.1
RB1P06400 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.44□□□□□ -0.1
RB1P06400 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RB1P06400 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms